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The map label for this gene is hchA [H]

Identifier: 238920177

GI number: 238920177

Start: 2188711

End: 2189073

Strand: Reverse

Name: hchA [H]

Synonym: NT01EI_2286

Alternate gene names: 238920177

Gene position: 2189073-2188711 (Counterclockwise)

Preceding gene: 238920178

Following gene: 238920176

Centisome position: 57.42

GC content: 58.4

Gene sequence:

>363_bases
GTGCTGTATCAGCGTTATCAGCCTCAGTTTCATCGCCTGCATCGTCTGTGGGATGTTCTGCCAGTGTTGACGGCGGAAGA
GCAGGATTACGTCGGCGTATTTATTCCCGGCACGCTTCTCAGCCAGCCTTCTGACGTCGATGTGGCGGAGACGATCCGCT
GGACCATGCGCCGCGATCGCTATCTGATCGCCATTTGTCATGGTCCAGAGGTGATTCTCACTCTTGCTCAGGGGGATAGC
CCGCAGCGGAGAGATGTCCTTGCGGCTTCCCCGATAGCGCCGACCGGTAAACGTCAGCGATCGGCTATATGCCGGGCGAG
CTGCCGTGGTTTTTCGGAGAGCAGCTACAGGCGATGGGCATGA

Upstream 100 bases:

>100_bases
TGTGAGGAGGTAGGTCTCTAGTGGTTTGTTCAGTATAGAAGCACTATATGTGGCTTTTTGATCGGTACCGGGCTTTGGGG
CAGGGGCCACGTCGATTCAG

Downstream 100 bases:

>100_bases
CCCTGGCCAATACGGCAATTTCGGGGCAGGTACATCAAGATCGCATATGGCGCCTGCCGCGTCGCGTTTCTGATGGGAGC
GTGGCTCAATGCACTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Hsp31 [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLYQRYQPQFHRLHRLWDVLPVLTAEEQDYVGVFIPGTLLSQPSDVDVAETIRWTMRRDRYLIAICHGPEVILTLAQGDS
PQRRDVLAASPIAPTGKRQRSAICRASCRGFSESSYRRWA

Sequences:

>Translated_120_residues
MLYQRYQPQFHRLHRLWDVLPVLTAEEQDYVGVFIPGTLLSQPSDVDVAETIRWTMRRDRYLIAICHGPEVILTLAQGDS
PQRRDVLAASPIAPTGKRQRSAICRASCRGFSESSYRRWA
>Mature_120_residues
MLYQRYQPQFHRLHRLWDVLPVLTAEEQDYVGVFIPGTLLSQPSDVDVAETIRWTMRRDRYLIAICHGPEVILTLAQGDS
PQRRDVLAASPIAPTGKRQRSAICRASCRGFSESSYRRWA

Specific function: Uses temperature-induced exposure of structured hydrophobic domains to capture and stabilize early unfolding protein intermediates under severe thermal stress. It rapidly releases them once stress has abated [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family. HchA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788278, Length=95, Percent_Identity=32.6315789473684, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017283
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 13815; Mature: 13815

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQRYQPQFHRLHRLWDVLPVLTAEEQDYVGVFIPGTLLSQPSDVDVAETIRWTMRRDR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHCCCC
YLIAICHGPEVILTLAQGDSPQRRDVLAASPIAPTGKRQRSAICRASCRGFSESSYRRWA
EEEEEECCCEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLYQRYQPQFHRLHRLWDVLPVLTAEEQDYVGVFIPGTLLSQPSDVDVAETIRWTMRRDR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHCCCC
YLIAICHGPEVILTLAQGDSPQRRDVLAASPIAPTGKRQRSAICRASCRGFSESSYRRWA
EEEEEECCCEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA