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The map label for this gene is glpM [H]

Identifier: 238920175

GI number: 238920175

Start: 2188395

End: 2188583

Strand: Direct

Name: glpM [H]

Synonym: NT01EI_2285

Alternate gene names: 238920175

Gene position: 2188395-2188583 (Clockwise)

Preceding gene: 238920174

Following gene: 238920179

Centisome position: 57.4

GC content: 57.67

Gene sequence:

>189_bases
ATGTTCCCCACCTTCGCGCTGATCGCACACTACATCGTAGATCATGAACACAGCCTTGACACCCTGCGCCGCACGATCCT
GTTCGGCATCTGGACCACCATTCCCTATCTTGTCTACCTGCTCTCGCTGTACCTGCTGCTTCCCCATATTCGTCTCTCCC
TGGCACTGCTGGGCGCCATCGTCGCCTAG

Upstream 100 bases:

>100_bases
AAGGAGTGCCGCGCAATGGGACTCACCCTCAAAGCGCCGATCGGCGCACTGGCAGTAGCTTTCGCGCAGCAAAAGCTACT
ATCTGGCAAGACTGGTGCCC

Downstream 100 bases:

>100_bases
GGGATCGCCGCCACGCTGCTGATCCTGCGGTGAGTGCATTGAGCCACGCTCCCATCAGAAACGCGACGCGGCAGGCGCCA
TATGCGATCTTGATGTACCT

Product: membrane protein GlpM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MFPTFALIAHYIVDHEHSLDTLRRTILFGIWTTIPYLVYLLSLYLLLPHIRLSLALLGAIVA

Sequences:

>Translated_62_residues
MFPTFALIAHYIVDHEHSLDTLRRTILFGIWTTIPYLVYLLSLYLLLPHIRLSLALLGAIVA
>Mature_62_residues
MFPTFALIAHYIVDHEHSLDTLRRTILFGIWTTIPYLVYLLSLYLLLPHIRLSLALLGAIVA

Specific function: Could play a role in alginate biosynthesis. Overexpression may be lethal [H]

COG id: COG3136

COG function: function code R; Uncharacterized membrane protein required for alginate biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgC [H]

Homologues:

Organism=Escherichia coli, GI1787892, Length=60, Percent_Identity=51.6666666666667, Blast_Score=69, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009707
- ProDom:   PD028709 [H]

Pfam domain/function: PF06942 GlpM [H]

EC number: NA

Molecular weight: Translated: 7121; Mature: 7121

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPTFALIAHYIVDHEHSLDTLRRTILFGIWTTIPYLVYLLSLYLLLPHIRLSLALLGAI
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VA
HC
>Mature Secondary Structure
MFPTFALIAHYIVDHEHSLDTLRRTILFGIWTTIPYLVYLLSLYLLLPHIRLSLALLGAI
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VA
HC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7642508; 10984043 [H]