| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yecF [H]
Identifier: 238920174
GI number: 238920174
Start: 2187974
End: 2188198
Strand: Direct
Name: yecF [H]
Synonym: NT01EI_2283
Alternate gene names: 238920174
Gene position: 2187974-2188198 (Clockwise)
Preceding gene: 238920170
Following gene: 238920175
Centisome position: 57.39
GC content: 51.11
Gene sequence:
>225_bases ATGAGTAACGTTGATTTTTCTACCGAAGCGACCATTGAAGCCTTAACGCACGAAGTCACCTGCCTGAAAGCGACCCTGAC CGAGATGCTCAAGGCGATGGGCCAGGCTGACGCCGGTAAAGTGATCATCAACATGGAAAAATACGCCGCCCGCATCGAGG ATCAGGAGCAATCTGACGCCTTTAAGAAAACCATGGCGCAGATCAAGCACGTCTATCGTCAGTAA
Upstream 100 bases:
>100_bases TACTCCGCTACCGATTTTGCTCTGCGTAATCGTTATTGCCCCCCAATGAACAGCCGTGTGCCACAGGCGAGCGGTATATT ATCTGAACAAAAGGTAACTT
Downstream 100 bases:
>100_bases CCGATTCCCGCCGATAACCGGGCGGAGCTCCCCGGCACTGCGGGTATCGTTGTCAATGACGCGCCCTGTTCAGGGGGATT CTCCGCCCCCCCCGCAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSNVDFSTEATIEALTHEVTCLKATLTEMLKAMGQADAGKVIINMEKYAARIEDQEQSDAFKKTMAQIKHVYRQ
Sequences:
>Translated_74_residues MSNVDFSTEATIEALTHEVTCLKATLTEMLKAMGQADAGKVIINMEKYAARIEDQEQSDAFKKTMAQIKHVYRQ >Mature_73_residues SNVDFSTEATIEALTHEVTCLKATLTEMLKAMGQADAGKVIINMEKYAARIEDQEQSDAFKKTMAQIKHVYRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788223, Length=74, Percent_Identity=58.1081081081081, Blast_Score=87, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019705 [H]
Pfam domain/function: PF10769 DUF2594 [H]
EC number: NA
Molecular weight: Translated: 8324; Mature: 8192
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVDFSTEATIEALTHEVTCLKATLTEMLKAMGQADAGKVIINMEKYAARIEDQEQSDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCHHHHH FKKTMAQIKHVYRQ HHHHHHHHHHHHCC >Mature Secondary Structure SNVDFSTEATIEALTHEVTCLKATLTEMLKAMGQADAGKVIINMEKYAARIEDQEQSDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCHHHHH FKKTMAQIKHVYRQ HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]