The gene/protein map for NC_012779 is currently unavailable.
Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238920169

Identifier: 238920169

GI number: 238920169

Start: 2180960

End: 2182639

Strand: Direct

Name: 238920169

Synonym: NT01EI_2275

Alternate gene names: NA

Gene position: 2180960-2182639 (Clockwise)

Preceding gene: 238920168

Following gene: 238920170

Centisome position: 57.21

GC content: 64.05

Gene sequence:

>1680_bases
GTGCTAAACGGTGTCGGCAGGGGCTTTATCACGATCACCCCGGAAGAGGCCACCACTGGCCTGGCTGGCGCCATGGTGCA
AATCGACCTGGGTGAGGGAACCGAGGCATGGCGCTATTTTACCGGCTACGTCGAACGTGATCAGCCGGCAGAGAACGGCG
CCCGCCGGCTGTTTGTGCGTGAGGCTGCAGGCCTGCTGGACTTTGAGTTACCCTGCTCCCATCAGCACCCGACGCTAAAA
ACCGTCCTGGACACCCTCAGCCAGCAGAGCGGTCTGACTATCTACGCGCCGACGGATGAGAGCTACAGCACCACCAGGAT
CCCACACCTGACCCATGCAGGCAGCGGCACGCAGCTGCTCGCCCAACTGGGGCGCTGTTTTGCGATCCCGGATTACGTCT
GGCACCCCATGCCTGACGGCAGCGTCTACGTCGGCAGCGCCAAACAGTCGCGCTTTGCCAGCCTCGCGCTGCCCGAACTG
CCGCCGCAGTACCTCATCAGCCAGAGCGCTGGCAACAGCGCCACGCTGATGCCGATCCCCACGCTACGCCCCGGCGTTAA
TCTGCCGAACGGGCGCATCACCGATGTCGCCGTCAAAGACAGCGCCATGACACTGACCTGGGCGCGCCTGGATGCCAGCG
GCAAACCGCTATCGAAAAGCCCAACGCGCCGGTTGATCGAGGGAGAGTTTCCCGAGTTGGCCAGCGGCGCGCTGCGCACC
CGGCTGGCCCGCGTCGTATCCCCAACAGAAAGCGCCAGCCTGGGCGACGTGGCTGATCCGTTCCGGCCAAAATACGCCGT
TGATCTGCAGCTACTCGACGAACAGGGTAATGACCTGCCGGATACCCCGGTTTATGCTGCGGTTCCCCTCCCCGTTCCCA
TGGCAGGACCGGAGGCCGGACTGCTGGCCTACCCGCCCGAGGGAACGCTGGTTGAGGTCGCATTTGTCGAAGGCCGCCCA
GACAAACCCATGGTGCGCCAGCTCATCCCACAGGGACATAGCCTGCCCGACATCAAGCCAGGCGAGCAGCTGCAGCAGCA
GCGCGCGGAGGTATTCCAGCGCGTCGGGCAGGATGGCAGCTGGCACCGAGAAACCGATCAGGTTATCCGTGAGGCCTCGG
CGCAGCGCGACATCACCAGCGACAGCGAGAGCAGAACGACAACCACGCGCGAAACCCTGGTGCAGGCCAACGACACAACC
ACCGTACTCGGTACCGCCAGACTACTGGCAGGCCATGTCATCCAGATAGCGGACGGCGACTACAGCATCGCCGCCGGCAA
CCAGCTGCTGGTGAAAGCCAGGGCGCTACTGGCGGAGCTGGAGCGCGCCGAGCTGACCATCAACGGCCCACTCACGGAAA
CCGTCACCGGCAATGTCGAACGCACCACCGGCGGCAACCACACCGAGACCACTACCGGCCAGCACAGCATCGAGGCAGCC
CAGATGGACATCACGACCGGTCGTGTGTTTATGGGCAGAGGTAGCTCGCATCAGAGCACCGATCGCCTGAACCTGCTAAC
GCTGCTGCTTGATATCCTCGACCTGGTCAATCAGCTGGCGCAGCACACCGCTGCACACACCCACAGCAACACCGGCAGCC
CCACCAACAGCGGCAGCCTGTCCGGCGACGCCACCCAGGCCACCAACCTGAAAGCCAGATACCGCGATCTCATCGCCTGA

Upstream 100 bases:

>100_bases
GCATTGGCGCAGTGAAAGACGGGGGCCGCAAATGAAACCGATTCAACTCTGCACCGTTGCCGGCAAAGCCTATCAGCCAG
CAAGCATGGAGCTTGTCCTG

Downstream 100 bases:

>100_bases
TCTGCGGCCACCCGGCCGCATCCCCCACCAATACCCCATGTAAAACGCACAAGAGCCACCCTGCGAGCCCGCACAACTAA
GCTATCGCACACCCCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLNGVGRGFITITPEEATTGLAGAMVQIDLGEGTEAWRYFTGYVERDQPAENGARRLFVREAAGLLDFELPCSHQHPTLK
TVLDTLSQQSGLTIYAPTDESYSTTRIPHLTHAGSGTQLLAQLGRCFAIPDYVWHPMPDGSVYVGSAKQSRFASLALPEL
PPQYLISQSAGNSATLMPIPTLRPGVNLPNGRITDVAVKDSAMTLTWARLDASGKPLSKSPTRRLIEGEFPELASGALRT
RLARVVSPTESASLGDVADPFRPKYAVDLQLLDEQGNDLPDTPVYAAVPLPVPMAGPEAGLLAYPPEGTLVEVAFVEGRP
DKPMVRQLIPQGHSLPDIKPGEQLQQQRAEVFQRVGQDGSWHRETDQVIREASAQRDITSDSESRTTTTRETLVQANDTT
TVLGTARLLAGHVIQIADGDYSIAAGNQLLVKARALLAELERAELTINGPLTETVTGNVERTTGGNHTETTTGQHSIEAA
QMDITTGRVFMGRGSSHQSTDRLNLLTLLLDILDLVNQLAQHTAAHTHSNTGSPTNSGSLSGDATQATNLKARYRDLIA

Sequences:

>Translated_559_residues
MLNGVGRGFITITPEEATTGLAGAMVQIDLGEGTEAWRYFTGYVERDQPAENGARRLFVREAAGLLDFELPCSHQHPTLK
TVLDTLSQQSGLTIYAPTDESYSTTRIPHLTHAGSGTQLLAQLGRCFAIPDYVWHPMPDGSVYVGSAKQSRFASLALPEL
PPQYLISQSAGNSATLMPIPTLRPGVNLPNGRITDVAVKDSAMTLTWARLDASGKPLSKSPTRRLIEGEFPELASGALRT
RLARVVSPTESASLGDVADPFRPKYAVDLQLLDEQGNDLPDTPVYAAVPLPVPMAGPEAGLLAYPPEGTLVEVAFVEGRP
DKPMVRQLIPQGHSLPDIKPGEQLQQQRAEVFQRVGQDGSWHRETDQVIREASAQRDITSDSESRTTTTRETLVQANDTT
TVLGTARLLAGHVIQIADGDYSIAAGNQLLVKARALLAELERAELTINGPLTETVTGNVERTTGGNHTETTTGQHSIEAA
QMDITTGRVFMGRGSSHQSTDRLNLLTLLLDILDLVNQLAQHTAAHTHSNTGSPTNSGSLSGDATQATNLKARYRDLIA
>Mature_559_residues
MLNGVGRGFITITPEEATTGLAGAMVQIDLGEGTEAWRYFTGYVERDQPAENGARRLFVREAAGLLDFELPCSHQHPTLK
TVLDTLSQQSGLTIYAPTDESYSTTRIPHLTHAGSGTQLLAQLGRCFAIPDYVWHPMPDGSVYVGSAKQSRFASLALPEL
PPQYLISQSAGNSATLMPIPTLRPGVNLPNGRITDVAVKDSAMTLTWARLDASGKPLSKSPTRRLIEGEFPELASGALRT
RLARVVSPTESASLGDVADPFRPKYAVDLQLLDEQGNDLPDTPVYAAVPLPVPMAGPEAGLLAYPPEGTLVEVAFVEGRP
DKPMVRQLIPQGHSLPDIKPGEQLQQQRAEVFQRVGQDGSWHRETDQVIREASAQRDITSDSESRTTTTRETLVQANDTT
TVLGTARLLAGHVIQIADGDYSIAAGNQLLVKARALLAELERAELTINGPLTETVTGNVERTTGGNHTETTTGQHSIEAA
QMDITTGRVFMGRGSSHQSTDRLNLLTLLLDILDLVNQLAQHTAAHTHSNTGSPTNSGSLSGDATQATNLKARYRDLIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60120; Mature: 60120

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGVGRGFITITPEEATTGLAGAMVQIDLGEGTEAWRYFTGYVERDQPAENGARRLFVR
CCCCCCCCEEEECCCHHCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHEEHHH
EAAGLLDFELPCSHQHPTLKTVLDTLSQQSGLTIYAPTDESYSTTRIPHLTHAGSGTQLL
HHCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCHHHHH
AQLGRCFAIPDYVWHPMPDGSVYVGSAKQSRFASLALPELPPQYLISQSAGNSATLMPIP
HHHHHHEECCHHHCCCCCCCCEEECCCCHHHHHHCCCCCCCHHHHHHCCCCCCEEEEECC
TLRPGVNLPNGRITDVAVKDSAMTLTWARLDASGKPLSKSPTRRLIEGEFPELASGALRT
CCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
RLARVVSPTESASLGDVADPFRPKYAVDLQLLDEQGNDLPDTPVYAAVPLPVPMAGPEAG
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
LLAYPPEGTLVEVAFVEGRPDKPMVRQLIPQGHSLPDIKPGEQLQQQRAEVFQRVGQDGS
EEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
WHRETDQVIREASAQRDITSDSESRTTTTRETLVQANDTTTVLGTARLLAGHVIQIADGD
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEECCCCEEEHHHHHHHHCCEEEEECCC
YSIAAGNQLLVKARALLAELERAELTINGPLTETVTGNVERTTGGNHTETTTGQHSIEAA
EEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE
QMDITTGRVFMGRGSSHQSTDRLNLLTLLLDILDLVNQLAQHTAAHTHSNTGSPTNSGSL
EEEEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SGDATQATNLKARYRDLIA
CCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNGVGRGFITITPEEATTGLAGAMVQIDLGEGTEAWRYFTGYVERDQPAENGARRLFVR
CCCCCCCCEEEECCCHHCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHEEHHH
EAAGLLDFELPCSHQHPTLKTVLDTLSQQSGLTIYAPTDESYSTTRIPHLTHAGSGTQLL
HHCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCHHHHH
AQLGRCFAIPDYVWHPMPDGSVYVGSAKQSRFASLALPELPPQYLISQSAGNSATLMPIP
HHHHHHEECCHHHCCCCCCCCEEECCCCHHHHHHCCCCCCCHHHHHHCCCCCCEEEEECC
TLRPGVNLPNGRITDVAVKDSAMTLTWARLDASGKPLSKSPTRRLIEGEFPELASGALRT
CCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
RLARVVSPTESASLGDVADPFRPKYAVDLQLLDEQGNDLPDTPVYAAVPLPVPMAGPEAG
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
LLAYPPEGTLVEVAFVEGRPDKPMVRQLIPQGHSLPDIKPGEQLQQQRAEVFQRVGQDGS
EEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
WHRETDQVIREASAQRDITSDSESRTTTTRETLVQANDTTTVLGTARLLAGHVIQIADGD
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEECCCCEEEHHHHHHHHCCEEEEECCC
YSIAAGNQLLVKARALLAELERAELTINGPLTETVTGNVERTTGGNHTETTTGQHSIEAA
EEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE
QMDITTGRVFMGRGSSHQSTDRLNLLTLLLDILDLVNQLAQHTAAHTHSNTGSPTNSGSL
EEEEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SGDATQATNLKARYRDLIA
CCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA