| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920167
Identifier: 238920167
GI number: 238920167
Start: 2179616
End: 2180338
Strand: Direct
Name: 238920167
Synonym: NT01EI_2273
Alternate gene names: NA
Gene position: 2179616-2180338 (Clockwise)
Preceding gene: 238920166
Following gene: 238920168
Centisome position: 57.17
GC content: 58.23
Gene sequence:
>723_bases ATGCCCTGGCAACGCGTCCATCTCACCCTGCCGGATGAATTACCGCCAATAACCTGTTCTGTCCTGGCTGTCCATCCGTG GACCCATGGTGCCGGGCTGCGCACAGACTCCGGCTGTTACTTAAGCCCGGAAAATGCGATTGCTTTTCTGGCTGACCGAA TCGGAGCCATTTCAGATACACAGGATTTTTTGCTGTTTCTGGTATGTGCCGGGGCTGCGGATGACTTTGCCCGCCGTCTG ACCGAACTCGCCGGGGTTCTCCCCCTGCCGGAAATCGCGCGACTGCGCCGTCTGGTTGATGCCGGGCAGATCCTTGCAGA AAGCCGCATGCAAATTCCGGCCCGTCCACGCCCCGGAATTCCCGCACCGACCCGCCTGTCCCTTTCCAATCTCCGTCAAC TCCATGCCGCCGGACAGGCAACTACGGCCATGATGCCCATGGCAGGCAGTCTGACTGAACTGTCACAGGTACTGCAGCGG TTTCACCGCCAGCGCAACGAACACCTGAATACCCTGCGTGAGCACACGCAACGTCTGCAACAGACCAGTTGCGAACTGTG GCAATTCAGCCCGGCGCAGAATACCCGGGATGTCCGCCAGCCTCTGCAATGGAATATTCCACAGCCTGAGGCAAGTTTCT CGCTGGGTCTGTTGTTTGTCGGCGATGACCTGTCAACACTGCGAGCCTGTATATATGAACCAGATAATCGTCCTCGCCCT TGA
Upstream 100 bases:
>100_bases AGGAGCGCTTACTGGCATGGCGGAAATACCGTGCGCAGGTGGATGACATCTCTGCGGACACACCCCATATTGACTGGCCC GCTATGCCGGAGTAATCACC
Downstream 100 bases:
>100_bases TGGCGAATCTATCCTGCTGCAGAACATCAATATCAGCATCACCCTGCGCCTGCCGGATAAAGACATGTCCGGACAGGCCA GCAGCACAGCCAGCGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPWQRVHLTLPDELPPITCSVLAVHPWTHGAGLRTDSGCYLSPENAIAFLADRIGAISDTQDFLLFLVCAGAADDFARRL TELAGVLPLPEIARLRRLVDAGQILAESRMQIPARPRPGIPAPTRLSLSNLRQLHAAGQATTAMMPMAGSLTELSQVLQR FHRQRNEHLNTLREHTQRLQQTSCELWQFSPAQNTRDVRQPLQWNIPQPEASFSLGLLFVGDDLSTLRACIYEPDNRPRP
Sequences:
>Translated_240_residues MPWQRVHLTLPDELPPITCSVLAVHPWTHGAGLRTDSGCYLSPENAIAFLADRIGAISDTQDFLLFLVCAGAADDFARRL TELAGVLPLPEIARLRRLVDAGQILAESRMQIPARPRPGIPAPTRLSLSNLRQLHAAGQATTAMMPMAGSLTELSQVLQR FHRQRNEHLNTLREHTQRLQQTSCELWQFSPAQNTRDVRQPLQWNIPQPEASFSLGLLFVGDDLSTLRACIYEPDNRPRP >Mature_239_residues PWQRVHLTLPDELPPITCSVLAVHPWTHGAGLRTDSGCYLSPENAIAFLADRIGAISDTQDFLLFLVCAGAADDFARRLT ELAGVLPLPEIARLRRLVDAGQILAESRMQIPARPRPGIPAPTRLSLSNLRQLHAAGQATTAMMPMAGSLTELSQVLQRF HRQRNEHLNTLREHTQRLQQTSCELWQFSPAQNTRDVRQPLQWNIPQPEASFSLGLLFVGDDLSTLRACIYEPDNRPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26806; Mature: 26675
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWQRVHLTLPDELPPITCSVLAVHPWTHGAGLRTDSGCYLSPENAIAFLADRIGAISDT CCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCH QDFLLFLVCAGAADDFARRLTELAGVLPLPEIARLRRLVDAGQILAESRMQIPARPRPGI HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PAPTRLSLSNLRQLHAAGQATTAMMPMAGSLTELSQVLQRFHRQRNEHLNTLREHTQRLQ CCCCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTSCELWQFSPAQNTRDVRQPLQWNIPQPEASFSLGLLFVGDDLSTLRACIYEPDNRPRP HHHHHHEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure PWQRVHLTLPDELPPITCSVLAVHPWTHGAGLRTDSGCYLSPENAIAFLADRIGAISDT CCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCH QDFLLFLVCAGAADDFARRLTELAGVLPLPEIARLRRLVDAGQILAESRMQIPARPRPGI HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PAPTRLSLSNLRQLHAAGQATTAMMPMAGSLTELSQVLQRFHRQRNEHLNTLREHTQRLQ CCCCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTSCELWQFSPAQNTRDVRQPLQWNIPQPEASFSLGLLFVGDDLSTLRACIYEPDNRPRP HHHHHHEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA