| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is insQ [H]
Identifier: 238920106
GI number: 238920106
Start: 2131281
End: 2131598
Strand: Reverse
Name: insQ [H]
Synonym: NT01EI_2212
Alternate gene names: 238920106
Gene position: 2131598-2131281 (Counterclockwise)
Preceding gene: 238920107
Following gene: 238920105
Centisome position: 55.91
GC content: 54.4
Gene sequence:
>318_bases TTGATACTGGATCTGGGCTGGTATGAACTACGCCGCCAGATTGAGTACAAGCAGCTCTGGCGCGGTGGTCAGGTATTGGC GATTAATCCCGCCTACACCAGTCAGAAATGCGCCTGCTGTGGCCATACAGCGAAAGAAAACCGCCAGTCACAAAGCCATT TCGAGTGTCTGGAATGTGGATATACAGAGAACGCTGCTATCAACGGTGCCCGTAATATTTTAGCGGCGGGGCACGCCGCG TTAGCCGGTGGAGAGATGGCAGCTTTAGGCCGCCCGATGAAGCAGGAACCCACCGCAACGGCTCAGATCATGATTTGA
Upstream 100 bases:
>100_bases AGGGCGTGAAGCTCGATCAGCTCAACAGTCGGATATCGTTGCTAAAGGTACGGTAGAGCAGCACGGACGAAACGTCAAAG CCAAATCAGGGGTGAACCGC
Downstream 100 bases:
>100_bases GCGTAGTAGGAATCCTCCGCCTTCAGGCGGGGAGGATGTCAATCTCAGCGCTGAATTCACAAGCCGCCGCTCTCTGGGCT AACAGCCTACCCCAGTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MILDLGWYELRRQIEYKQLWRGGQVLAINPAYTSQKCACCGHTAKENRQSQSHFECLECGYTENAAINGARNILAAGHAA LAGGEMAALGRPMKQEPTATAQIMI
Sequences:
>Translated_105_residues MILDLGWYELRRQIEYKQLWRGGQVLAINPAYTSQKCACCGHTAKENRQSQSHFECLECGYTENAAINGARNILAAGHAA LAGGEMAALGRPMKQEPTATAQIMI >Mature_105_residues MILDLGWYELRRQIEYKQLWRGGQVLAINPAYTSQKCACCGHTAKENRQSQSHFECLECGYTENAAINGARNILAAGHAA LAGGEMAALGRPMKQEPTATAQIMI
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transposase 35 family [H]
Homologues:
Organism=Escherichia coli, GI288549314, Length=101, Percent_Identity=75.2475247524752, Blast_Score=164, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001959 - InterPro: IPR010095 - InterPro: IPR021027 [H]
Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]
EC number: NA
Molecular weight: Translated: 11511; Mature: 11511
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDLGWYELRRQIEYKQLWRGGQVLAINPAYTSQKCACCGHTAKENRQSQSHFECLECG CEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCC YTENAAINGARNILAAGHAALAGGEMAALGRPMKQEPTATAQIMI CCCCCCCCCHHHHHHHCCHHHCCCCHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure MILDLGWYELRRQIEYKQLWRGGQVLAINPAYTSQKCACCGHTAKENRQSQSHFECLECG CEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCC YTENAAINGARNILAAGHAALAGGEMAALGRPMKQEPTATAQIMI CCCCCCCCCHHHHHHHCCHHHCCCCHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]