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The map label for this gene is ynfM [H]

Identifier: 238919970

GI number: 238919970

Start: 1993699

End: 1994976

Strand: Direct

Name: ynfM [H]

Synonym: NT01EI_2074

Alternate gene names: 238919970

Gene position: 1993699-1994976 (Clockwise)

Preceding gene: 238919968

Following gene: 238919973

Centisome position: 52.3

GC content: 59.86

Gene sequence:

>1278_bases
GTGAATACCTCCCCGGCTGAAGCCGTGCCGGATACCGTCTCTCCGGCATCCACCGCCATCAGTGATGGCCTTAATGGTAA
ACCCCCTTTTATCACCCGCAGCCGCCCCGATTTTAAACGGGTCACATTGGCCCTGTTTTCAGCAGGGCTGGCCACCTTTG
CCCTGCTGTACTGCGTACAGCCTATTCTGCCGGTGCTATCGCAGGATTTCGCCATTACCCCGGCGACCAGTAGCCTATCG
CTGTCAGTTGCCACCGCCATGCTGGCCATCGGCCTGCTGTTTACCGGTCCGCTTTCCGATGCCGTCGGACGTAAAAATGT
CATGGTTACTGCGCTGCTGCTGGCGGCGATCTGCACGCTGATCTGCGCCATGATGGGCAGCTGGAATGCCATTCTGGTGA
TGCGGGCCTTAGTTGGAGTGGCTCTGAGCGGCGTAGCCGCCGTGGCTATGACCTATCTCAGTGAAGAGATGGATCCCTCG
GTTGTCGCCTTCTCCATGGGACTGTATATCAGCGGCAGCTCGATCGGCGGCATGAGCGGCCGACTGATCAGCGGTGTCAT
GACGGACTACTTCTCCTGGCGGCCAACCCTGGCCGTCATCGGACTATTTGCGCTGTGCGGCGCGCTGATGTTCTGGAAGA
TCCTGCCGCCCTCGCGCCATTTTCGTCCAACCTCCCTGCGCCCACGTAATCTGCTGCTCAATCTGCGCCTGCACTGCCAC
GATCGGGGACTTCCACTGCTGTTCGCCGAAGGTTTCTTGCTGATGGGTAGCTTTGTCACGCTGTTTAACTACATTGGCTA
CCGTCTGCTTGTCCCCCCTTATGGCCTCAGCCAGGCTATCGTCGGTGTACTTTCACTGGGTTATATCAGCGGCGCCTACA
GCTCACCCAAGGCCGGGGCGATGACCGCCAGCTTTGGCCGAGGCCCGGTGCTGAGCGGCGCGATAATCATTATGCTGTTG
GGACTGCTGCTTACCGCTTTCTCCACACTGTGGCTGGTGTTTATTGGCATGGTACTGTTTACCACCGGCTTCTTCGCCGC
CCACTCCGTGGCCAGCAGTTGGATCGGACGCCGGGCGCGCCGGGCCAAAGGCCAGGCCTCCTCGCTCTATTTGTTCAGTT
ACTACGCCGGCTCCAGCGTCGCCGGTACGCTGGGCGGCGTGTTCTGGCACAGTTACGGCTGGAACGGTATCGTCATCTTC
CTGGTCGTCATGCTGCTGCTCGCATGGCTGCTGGGGCGCCGTCTACAGCGTCTTCCTGAAGCCACCCTGCTATCATAG

Upstream 100 bases:

>100_bases
AATTCTATGCTCGCCATCACATAGCCTGGCTCCGTGTCAACATCGCAGCTTGTGATGCCCCCAGTGCTGACTCTCTGTTT
GCTCCATACAAGGATATTGT

Downstream 100 bases:

>100_bases
CATCCTTACCGGGCGGCCAAAGTGCAGCCCGGTACCGCTCGGTGATTTTAGCGCTGAGCGCGTTATGGCTCTCCATCAAA
AACTCATTTCTGGGCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNTSPAEAVPDTVSPASTAISDGLNGKPPFITRSRPDFKRVTLALFSAGLATFALLYCVQPILPVLSQDFAITPATSSLS
LSVATAMLAIGLLFTGPLSDAVGRKNVMVTALLLAAICTLICAMMGSWNAILVMRALVGVALSGVAAVAMTYLSEEMDPS
VVAFSMGLYISGSSIGGMSGRLISGVMTDYFSWRPTLAVIGLFALCGALMFWKILPPSRHFRPTSLRPRNLLLNLRLHCH
DRGLPLLFAEGFLLMGSFVTLFNYIGYRLLVPPYGLSQAIVGVLSLGYISGAYSSPKAGAMTASFGRGPVLSGAIIIMLL
GLLLTAFSTLWLVFIGMVLFTTGFFAAHSVASSWIGRRARRAKGQASSLYLFSYYAGSSVAGTLGGVFWHSYGWNGIVIF
LVVMLLLAWLLGRRLQRLPEATLLS

Sequences:

>Translated_425_residues
MNTSPAEAVPDTVSPASTAISDGLNGKPPFITRSRPDFKRVTLALFSAGLATFALLYCVQPILPVLSQDFAITPATSSLS
LSVATAMLAIGLLFTGPLSDAVGRKNVMVTALLLAAICTLICAMMGSWNAILVMRALVGVALSGVAAVAMTYLSEEMDPS
VVAFSMGLYISGSSIGGMSGRLISGVMTDYFSWRPTLAVIGLFALCGALMFWKILPPSRHFRPTSLRPRNLLLNLRLHCH
DRGLPLLFAEGFLLMGSFVTLFNYIGYRLLVPPYGLSQAIVGVLSLGYISGAYSSPKAGAMTASFGRGPVLSGAIIIMLL
GLLLTAFSTLWLVFIGMVLFTTGFFAAHSVASSWIGRRARRAKGQASSLYLFSYYAGSSVAGTLGGVFWHSYGWNGIVIF
LVVMLLLAWLLGRRLQRLPEATLLS
>Mature_425_residues
MNTSPAEAVPDTVSPASTAISDGLNGKPPFITRSRPDFKRVTLALFSAGLATFALLYCVQPILPVLSQDFAITPATSSLS
LSVATAMLAIGLLFTGPLSDAVGRKNVMVTALLLAAICTLICAMMGSWNAILVMRALVGVALSGVAAVAMTYLSEEMDPS
VVAFSMGLYISGSSIGGMSGRLISGVMTDYFSWRPTLAVIGLFALCGALMFWKILPPSRHFRPTSLRPRNLLLNLRLHCH
DRGLPLLFAEGFLLMGSFVTLFNYIGYRLLVPPYGLSQAIVGVLSLGYISGAYSSPKAGAMTASFGRGPVLSGAIIIMLL
GLLLTAFSTLWLVFIGMVLFTTGFFAAHSVASSWIGRRARRAKGQASSLYLFSYYAGSSVAGTLGGVFWHSYGWNGIVIF
LVVMLLLAWLLGRRLQRLPEATLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=404, Percent_Identity=72.7722772277228, Blast_Score=591, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45292; Mature: 45292

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSPAEAVPDTVSPASTAISDGLNGKPPFITRSRPDFKRVTLALFSAGLATFALLYCVQ
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PILPVLSQDFAITPATSSLSLSVATAMLAIGLLFTGPLSDAVGRKNVMVTALLLAAICTL
HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHH
ICAMMGSWNAILVMRALVGVALSGVAAVAMTYLSEEMDPSVVAFSMGLYISGSSIGGMSG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCCH
RLISGVMTDYFSWRPTLAVIGLFALCGALMFWKILPPSRHFRPTSLRPRNLLLNLRLHCH
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEC
DRGLPLLFAEGFLLMGSFVTLFNYIGYRLLVPPYGLSQAIVGVLSLGYISGAYSSPKAGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
MTASFGRGPVLSGAIIIMLLGLLLTAFSTLWLVFIGMVLFTTGFFAAHSVASSWIGRRAR
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAKGQASSLYLFSYYAGSSVAGTLGGVFWHSYGWNGIVIFLVVMLLLAWLLGRRLQRLPE
HHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ATLLS
HHCCC
>Mature Secondary Structure
MNTSPAEAVPDTVSPASTAISDGLNGKPPFITRSRPDFKRVTLALFSAGLATFALLYCVQ
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PILPVLSQDFAITPATSSLSLSVATAMLAIGLLFTGPLSDAVGRKNVMVTALLLAAICTL
HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHH
ICAMMGSWNAILVMRALVGVALSGVAAVAMTYLSEEMDPSVVAFSMGLYISGSSIGGMSG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCCH
RLISGVMTDYFSWRPTLAVIGLFALCGALMFWKILPPSRHFRPTSLRPRNLLLNLRLHCH
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEC
DRGLPLLFAEGFLLMGSFVTLFNYIGYRLLVPPYGLSQAIVGVLSLGYISGAYSSPKAGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
MTASFGRGPVLSGAIIIMLLGLLLTAFSTLWLVFIGMVLFTTGFFAAHSVASSWIGRRAR
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAKGQASSLYLFSYYAGSSVAGTLGGVFWHSYGWNGIVIFLVVMLLLAWLLGRRLQRLPE
HHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ATLLS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]