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The map label for this gene is yhjA [H]

Identifier: 238919965

GI number: 238919965

Start: 1988816

End: 1990285

Strand: Direct

Name: yhjA [H]

Synonym: NT01EI_2069

Alternate gene names: 238919965

Gene position: 1988816-1990285 (Clockwise)

Preceding gene: 238919962

Following gene: 238919968

Centisome position: 52.17

GC content: 54.08

Gene sequence:

>1470_bases
ATGAAAAAAATAACGAAATGGGCAGGCGGTATCGTCATTACCGGTATCGTCTGCTACTTAGGGTTGGTCGGCTATGTCTA
TAATCATGACAAACAACGTAATACCGTACCGAGTGAACCGGCAAGTTCAGCACTTAACGCTCAGGTATTAGGGATCTTGG
GCGAAAAAGGCTGTGACTACTGTCATACTCCATCGAGCAATTTACCGTTTTACGCCAGCGTTCCCGGCGTGAAGCAGCTG
ATGGAATATGATATGTATCAGGGATATAAGGCGTTCAATCTGATACCTCTGCGCGAAAGCCTGCTGAAACCCTCCCCGAG
GAAAGCCTCCAGCGGCCAACCGCCGACCCTGACGGATCTCAATAAGTTGGAGTGGGTGATTCAGCATCAGACCATGCCGC
CAACCCGTTATACCGCAATGCACTGGGCCGGCCGAATGTCGCAGGCCGATCGCGATACGCTGCTACAGTGGGTGGGTGAG
CAGCGTCAAAAATACTATTCGACACCGGATATGGCGCCATCGCTACGCAATGAGCCGATACAGCCGATCCCCGAGTCCTT
ACCGGTCAGTGCCGAAAAAGTCGCGCTGGGATTCCGTCTGTACCACGATCCGCGTTTATCCAGCAATAACACCGTGGCCT
GTGCCCATTGTCACCAATTGGGCGCTGGTGGCGTAGATGGAAGAAAAACATCGCTGGGCGTCGATGACCAGGTGGGCCCC
ATTAACGCCCCAACGGTGTTTAATGCTGTGTTCAATATTGCTCAATTCTGGGATGGGCGTGCGGCAACCCTGCAGGATCA
GGCGGGTGGTCCTCCGCTGAACCCGATCGAGATGGCATCTACATCGTGGGAGCAAATCATCGATAAGCTGAATCAAGATC
AGGCATTTAAGCAGGATTTCCTCAAGGTGTACCCGCAGGGATTCAGTGGAAAAAATATCACCGATGCCATCGCCGAGTTT
GAAAAAACGCTGATTACGCCGAACTCCGCGTTTGACCGCTATCTGCGCGGCGATAGCAACGCGCTCACTGCCCAGCAGCA
GCGCGGCTATCAGCTGTTTAAGGATAATCGCTGCGCAACCTGTCACGCTGGCGTTGCAATGGGCGGAGAGTCTTATGAAC
CTCTCGGACTGATCAAGGCATATCCGTTTGGCGAACTGACCAACGCTGATATCGGTAGAATGAACGTGACTCATGAACTG
CGCGATAAACTGCGCCAGAAGGTGCCGACGCTGCGTAACGTTGAGCTGACCGGTCCCTACTTCCACCGTGGTGATGTGAA
GACACTGGATGAGGCGGTGAAGCAAATGCTGCGCTATCAGGTTGGCGTCACCCTGCCGCAAAGCGATGTCAACGATATCG
TAGCCTTCCTGAAGAGCCTGACCGGTGTCTATACGCCCTATCCGATGAATACGGCACCCGCCGTAGAGACCCCGGCAGCA
CCGAAGAAGGTGGAGGCGGCCCATCCATAG

Upstream 100 bases:

>100_bases
TCGCCGCGATACTAGCCCGCACTATGAGCAAGTCGGTTCACCGACATTTGTCGGCTGCATCTGCAGCCGTATTGACACTC
TCAAAAGGAGTTTTGTAACA

Downstream 100 bases:

>100_bases
CCGTAGCCGTTAATGAAAAGCAAACGGGCGTGCACTATGCACGCCCGTTTCAGTAACAACATCTACCCATGCGCGGCTTC
AGTCCAGCGCAGATAAATCG

Product: cytochrome-c peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MKKITKWAGGIVITGIVCYLGLVGYVYNHDKQRNTVPSEPASSALNAQVLGILGEKGCDYCHTPSSNLPFYASVPGVKQL
MEYDMYQGYKAFNLIPLRESLLKPSPRKASSGQPPTLTDLNKLEWVIQHQTMPPTRYTAMHWAGRMSQADRDTLLQWVGE
QRQKYYSTPDMAPSLRNEPIQPIPESLPVSAEKVALGFRLYHDPRLSSNNTVACAHCHQLGAGGVDGRKTSLGVDDQVGP
INAPTVFNAVFNIAQFWDGRAATLQDQAGGPPLNPIEMASTSWEQIIDKLNQDQAFKQDFLKVYPQGFSGKNITDAIAEF
EKTLITPNSAFDRYLRGDSNALTAQQQRGYQLFKDNRCATCHAGVAMGGESYEPLGLIKAYPFGELTNADIGRMNVTHEL
RDKLRQKVPTLRNVELTGPYFHRGDVKTLDEAVKQMLRYQVGVTLPQSDVNDIVAFLKSLTGVYTPYPMNTAPAVETPAA
PKKVEAAHP

Sequences:

>Translated_489_residues
MKKITKWAGGIVITGIVCYLGLVGYVYNHDKQRNTVPSEPASSALNAQVLGILGEKGCDYCHTPSSNLPFYASVPGVKQL
MEYDMYQGYKAFNLIPLRESLLKPSPRKASSGQPPTLTDLNKLEWVIQHQTMPPTRYTAMHWAGRMSQADRDTLLQWVGE
QRQKYYSTPDMAPSLRNEPIQPIPESLPVSAEKVALGFRLYHDPRLSSNNTVACAHCHQLGAGGVDGRKTSLGVDDQVGP
INAPTVFNAVFNIAQFWDGRAATLQDQAGGPPLNPIEMASTSWEQIIDKLNQDQAFKQDFLKVYPQGFSGKNITDAIAEF
EKTLITPNSAFDRYLRGDSNALTAQQQRGYQLFKDNRCATCHAGVAMGGESYEPLGLIKAYPFGELTNADIGRMNVTHEL
RDKLRQKVPTLRNVELTGPYFHRGDVKTLDEAVKQMLRYQVGVTLPQSDVNDIVAFLKSLTGVYTPYPMNTAPAVETPAA
PKKVEAAHP
>Mature_489_residues
MKKITKWAGGIVITGIVCYLGLVGYVYNHDKQRNTVPSEPASSALNAQVLGILGEKGCDYCHTPSSNLPFYASVPGVKQL
MEYDMYQGYKAFNLIPLRESLLKPSPRKASSGQPPTLTDLNKLEWVIQHQTMPPTRYTAMHWAGRMSQADRDTLLQWVGE
QRQKYYSTPDMAPSLRNEPIQPIPESLPVSAEKVALGFRLYHDPRLSSNNTVACAHCHQLGAGGVDGRKTSLGVDDQVGP
INAPTVFNAVFNIAQFWDGRAATLQDQAGGPPLNPIEMASTSWEQIIDKLNQDQAFKQDFLKVYPQGFSGKNITDAIAEF
EKTLITPNSAFDRYLRGDSNALTAQQQRGYQLFKDNRCATCHAGVAMGGESYEPLGLIKAYPFGELTNADIGRMNVTHEL
RDKLRQKVPTLRNVELTGPYFHRGDVKTLDEAVKQMLRYQVGVTLPQSDVNDIVAFLKSLTGVYTPYPMNTAPAVETPAA
PKKVEAAHP

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=469, Percent_Identity=66.0980810234542, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 54033; Mature: 54033

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITKWAGGIVITGIVCYLGLVGYVYNHDKQRNTVPSEPASSALNAQVLGILGEKGCDY
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
CHTPSSNLPFYASVPGVKQLMEYDMYQGYKAFNLIPLRESLLKPSPRKASSGQPPTLTDL
CCCCCCCCCEEECCHHHHHHHHHHHHCCCHHEEEEECHHHHCCCCCCCCCCCCCCCCCCH
NKLEWVIQHQTMPPTRYTAMHWAGRMSQADRDTLLQWVGEQRQKYYSTPDMAPSLRNEPI
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCC
QPIPESLPVSAEKVALGFRLYHDPRLSSNNTVACAHCHQLGAGGVDGRKTSLGVDDQVGP
CCCCCCCCCCHHHHEEHEEEEECCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCC
INAPTVFNAVFNIAQFWDGRAATLQDQAGGPPLNPIEMASTSWEQIIDKLNQDQAFKQDF
CCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHH
LKVYPQGFSGKNITDAIAEFEKTLITPNSAFDRYLRGDSNALTAQQQRGYQLFKDNRCAT
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCEE
CHAGVAMGGESYEPLGLIKAYPFGELTNADIGRMNVTHELRDKLRQKVPTLRNVELTGPY
ECCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC
FHRGDVKTLDEAVKQMLRYQVGVTLPQSDVNDIVAFLKSLTGVYTPYPMNTAPAVETPAA
EECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKKVEAAHP
CCCCCCCCC
>Mature Secondary Structure
MKKITKWAGGIVITGIVCYLGLVGYVYNHDKQRNTVPSEPASSALNAQVLGILGEKGCDY
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
CHTPSSNLPFYASVPGVKQLMEYDMYQGYKAFNLIPLRESLLKPSPRKASSGQPPTLTDL
CCCCCCCCCEEECCHHHHHHHHHHHHCCCHHEEEEECHHHHCCCCCCCCCCCCCCCCCCH
NKLEWVIQHQTMPPTRYTAMHWAGRMSQADRDTLLQWVGEQRQKYYSTPDMAPSLRNEPI
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCC
QPIPESLPVSAEKVALGFRLYHDPRLSSNNTVACAHCHQLGAGGVDGRKTSLGVDDQVGP
CCCCCCCCCCHHHHEEHEEEEECCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCC
INAPTVFNAVFNIAQFWDGRAATLQDQAGGPPLNPIEMASTSWEQIIDKLNQDQAFKQDF
CCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHH
LKVYPQGFSGKNITDAIAEFEKTLITPNSAFDRYLRGDSNALTAQQQRGYQLFKDNRCAT
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHCCCHHHCCCCCEE
CHAGVAMGGESYEPLGLIKAYPFGELTNADIGRMNVTHELRDKLRQKVPTLRNVELTGPY
ECCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC
FHRGDVKTLDEAVKQMLRYQVGVTLPQSDVNDIVAFLKSLTGVYTPYPMNTAPAVETPAA
EECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKKVEAAHP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]