| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919960
Identifier: 238919960
GI number: 238919960
Start: 1985146
End: 1985310
Strand: Reverse
Name: 238919960
Synonym: NT01EI_2064
Alternate gene names: NA
Gene position: 1985310-1985146 (Counterclockwise)
Preceding gene: 238919961
Following gene: 238919959
Centisome position: 52.08
GC content: 30.91
Gene sequence:
>165_bases GTGGTGAATGACATCTGGTTTAATAAAATCTTGATCTTTTGTGCTAAACAAGACTGTTTTGCAATGCTGCTGTGTACGTT TTTGAATCTCTATGTTGAAATAAGTGGTTTCTTTTTGAGTAGTATTGAAAGAATAATCGTAATGACATCCGTTACTTTTA AATAA
Upstream 100 bases:
>100_bases AACCATTGCTTAAATCTTGAACTTCACATTGCTAAAGGCTTAAAAATTTCTCTATTAGCCAGATTGGATAATATTATGCA TCTTTGCATTATGTTTTCTG
Downstream 100 bases:
>100_bases ATAATATTTCTCGCAATGAATCATTAATCTATGATGAGTTGCGTTGAATTATATATTCACCATAGATTAACACACCTATT TTTACATTATTGAGCGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MVNDIWFNKILIFCAKQDCFAMLLCTFLNLYVEISGFFLSSIERIIVMTSVTFK
Sequences:
>Translated_54_residues MVNDIWFNKILIFCAKQDCFAMLLCTFLNLYVEISGFFLSSIERIIVMTSVTFK >Mature_54_residues MVNDIWFNKILIFCAKQDCFAMLLCTFLNLYVEISGFFLSSIERIIVMTSVTFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6319; Mature: 6319
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNDIWFNKILIFCAKQDCFAMLLCTFLNLYVEISGFFLSSIERIIVMTSVTFK CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVNDIWFNKILIFCAKQDCFAMLLCTFLNLYVEISGFFLSSIERIIVMTSVTFK CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA