| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ureA
Identifier: 238919959
GI number: 238919959
Start: 1984643
End: 1984945
Strand: Reverse
Name: ureA
Synonym: NT01EI_2063
Alternate gene names: 238919959
Gene position: 1984945-1984643 (Counterclockwise)
Preceding gene: 238919960
Following gene: 238919958
Centisome position: 52.07
GC content: 46.2
Gene sequence:
>303_bases ATGCAGTTAACTCCTAGAGAAGTGGAGAAGTTAATGGTTTACACGCTGGCGGATGTTGCGTTAAAACGCAAACAGCGTGG TGTGAAGCTGAACTATCCTGAAGCTGTATCGATTATTACAGTAACGGCCATGGAAGGTGCCAGAGATGGAAAAACCGTCG AGGAAGTGATGAATGAAGCGCGAAGTGTATTGACCCGCGATGATGTCATGGATGGCGTTGTGGAGCTAATTCCGAACGTA CAGGTAGAAGCCATCTTTACGGATGGGAGTCGCTTAGTTACTGTTCATGATCCTATCCAATAA
Upstream 100 bases:
>100_bases GCTGTGTTGATTGTGTTTAGGAGAGGATCGCACAGCAACGTAGTGTTGTATTTATAAGCAAAGAGATACAATCGAAACAA GCGAAAAGAGGTGATTGATT
Downstream 100 bases:
>100_bases AACAGATTATCTGGTTTTTAGTTTCTTTGTTTTATAATTAAGGAGCATGAAAATGACCAATGCGAAAAATAGTAAGGCTA AAGTAAAAGAGAGTAACGTA
Product: urease subunit gamma
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MQLTPREVEKLMVYTLADVALKRKQRGVKLNYPEAVSIITVTAMEGARDGKTVEEVMNEARSVLTRDDVMDGVVELIPNV QVEAIFTDGSRLVTVHDPIQ
Sequences:
>Translated_100_residues MQLTPREVEKLMVYTLADVALKRKQRGVKLNYPEAVSIITVTAMEGARDGKTVEEVMNEARSVLTRDDVMDGVVELIPNV QVEAIFTDGSRLVTVHDPIQ >Mature_100_residues MQLTPREVEKLMVYTLADVALKRKQRGVKLNYPEAVSIITVTAMEGARDGKTVEEVMNEARSVLTRDDVMDGVVELIPNV QVEAIFTDGSRLVTVHDPIQ
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease gamma subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE3_EDWI9 (C5BDC2)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933474.1 - ProteinModelPortal: C5BDC2 - SMR: C5BDC2 - GeneID: 7961372 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2063 - OMA: FTQRETD - ProtClustDB: PRK13241 - GO: GO:0005737 - HAMAP: MF_00739 - InterPro: IPR002026 - InterPro: IPR012010 - Gene3D: G3DSA:3.30.280.10 - PIRSF: PIRSF001223 - ProDom: PD002319 - TIGRFAMs: TIGR00193
Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg
EC number: =3.5.1.5
Molecular weight: Translated: 11140; Mature: 11140
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTPREVEKLMVYTLADVALKRKQRGVKLNYPEAVSIITVTAMEGARDGKTVEEVMNEA CCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCCCHHHHHHHHH RSVLTRDDVMDGVVELIPNVQVEAIFTDGSRLVTVHDPIQ HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCC >Mature Secondary Structure MQLTPREVEKLMVYTLADVALKRKQRGVKLNYPEAVSIITVTAMEGARDGKTVEEVMNEA CCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCCCHHHHHHHHH RSVLTRDDVMDGVVELIPNVQVEAIFTDGSRLVTVHDPIQ HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA