| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919934
Identifier: 238919934
GI number: 238919934
Start: 1959673
End: 1962072
Strand: Reverse
Name: 238919934
Synonym: NT01EI_2038
Alternate gene names: NA
Gene position: 1962072-1959673 (Counterclockwise)
Preceding gene: 238919935
Following gene: 238919932
Centisome position: 51.47
GC content: 47.75
Gene sequence:
>2400_bases ATGGAAAGGTTTCTTCTTAACTCAACAGTACTGTTGCATAGGCTGAGCACAGTCTCTTTGGATGAGGTATCACTTGATGA GAGGGTGGAGTCATCTGTGTTCCTTGCTCAATACGAACAGGAGCGTAGTTTGCCTGATCATGTAGCTAAATCGGCTTGGT CATCTTTAGTGCAGCAAATCAAACAGCGGAATATGAAACTCGGCCCAGTAGCGACCTTACGCCAGATAGCTGAAAAGTTT ATTAAAAACGAGAAAGGTGGCCCCAAAATCGATCTACCTATGTTCTCGGAATGGCAAACGCTGATGAGCCGAGTGTCGTG CCTACCAATTATGGCGTGTCATCAGGTATTTAACCCTGGGGCTGCCAGTCAGGAATATAGCTTTCGCTGGCCTTTATACC CATATCACCCAACGGTTGAAGACTACATTACCCGTGAATGCCTACACGAAACTCACCAACACCTGAATGGCAGTACCAGT GCGGAAGAGTGTTGGCTGGATGCACTCAAGCACCCAGATGTGAGCGTCAGAGATTTCGAGAAGGGCTGGGCATCTCAAGA GATGAAACAACTCTGCGCCCAGATTGACCCCTCTCTGACGCCTGAAATCTTTAAGGATCGTTTGCAAATCGCCTGTAATA TTCGTGAAATTCTTTGTCGGGTTGCTCAGGGCGTGGAGTTGCCAGAATGGATAGCATCGATGCAGTATCCGCAGCAGTTG GCGGATAGCACCATTCTGCATAATGGCCAGGAGTATGGGTTTGCGACGGTTTGGCCAACTGACGACAAATACAGTCAGGA GTCTGAATTTTGCTGGCTAACCGGGTTGTTGGAAAAATGGCGGTATAATGCGCCCGAAGGTTTAGAACGACTGCTTTGGG TTTACCTGCTGATGCAAAATCAGTACTTGACCTTACTGGTTCAGCGAGACGATTTTTTCGGTTTTGATCAGTTCCAGAAT TACACCATGACGGAGTTGAGGGAGGAAACAGAGAAATCTTATTTGTCTCGTTTTAAACATGCCCATGGTGCTGGTGTGTA TTCTCAGGTGCGTTATCTGGAAGGACGTTTTGCTCCGAAGAGCGACCCAAGAAAAATGCAAAAACTGCTCTTCAGTGTGT TAAGAGGATATTGGGAATACCTGAGTGCTCATATGTCTCTGGAATGGGTGCATGAGAAGCCGCTGACTATGTCGCAAGTG CTCGATAACCTCGAACTGGTTGAACCTCATGGCAAGTGTGCAGAACTGGCGCTAGTGCCGCACTTTATTAAAAGAAAGCC AAAAAATGGTGAGGTCTATCCTTACGCATTACTATTCAAAGAACTGAAAAATCAGGCAGCTATTCTGATGGACATGCTGA AGTCTGAACCGCGCCTGACAGGCTGGATTCGAGGAGTGGATGCCGCAGCTAATGAGATGCACGCACCACCGGAGTTGTTT AGCCCCTTGTTCCGGGTGCTAGCCAAATCAGGTATTGCTCATTTTACCTATCATGTTGGCGAGGACTTTCCGCATCTGAT CAGTGGTATTCGATCCATTGATGATGCCTTGAGATTTTTGCCATTGCGTAATGGCGACCGCCTTGGCCACTGCACGGCGA TTGGCATCACACCTAATATCTGGAAACGCTCTTTGCCCTTGTCTTTGTCCATGACCAAAGAGACGAGATTGCTCGATTTG GTGTTTATCTGGCGGGAACTTCGAAGTCATCCGGAACTGCTGCGTTACGCCAGTGATGCAGCGATTGAAGCAGTTCGCTT GGCCCATAAAGTGTTTTCGCTGGAAGAAGAAGTCTCGATTACCACCCTTGATCAGGTATTTGAAATGCGGGGGCTGTTGG CGGAATCGGAAGGTCTGCTGGGTGAACTAAATGGGCCATTAAAACCTAAATCCCTCTGGTTGGAAGAGTACGAGCGCGCC AGAGAGTTGGTTAAAACGACGGGTATGAAAAGGCCCCTGAAGTTGTATAAGCAATGGCTTACATCTGACAATGTGCGAAA GCAGCGTGGTGAATATGTTGAAGTTGCCCTGGAATATTTGCCGGATGAAGCGGTTGTTGCATTACAACAAGCTGTAATGG CAAAAATGGCAGACCGAAACATTGCGATAGAATGCCCTCCGACCAGCAATACCCGTATCAGTCAGTATCGAGATGTCAGC GAGCATCATATCTTTCGCTGGATGGGCTTGCCGGGTGAGGCGATTGAAGGTGATGTTCCTATGTCTATTTGTCTTGGATC TGATGATCCGGGGATCTTTGCCGCAGATTTGAAATCCGAGTTCTATCATCTGTTCATTGTGTTAACCCGAAATTTCGGTT TGTCGCCAGCGGAGGCTTTGGGAAAGGTGGCAGAGGTGAATGAGAATGGGCGGATTTATCGCTTTCATGATGTTAGCTAG
Upstream 100 bases:
>100_bases GAGCGTCATACGATAAGGTTACGCCAGCTAGGAAAACCAAGTCGCCTTCATTAAGTAACGGCGAAGAAAAATGATAATGA TCTTCGTATAAGGATTGGGT
Downstream 100 bases:
>100_bases CCTGTATACATTGATGATTCTGTGATCGTTCAAGACTCGCTGGGTTAAACGTTAACGTCCGCAAATCGCTCTTCGCGGAC GTTTAGTTAGTAGATTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MERFLLNSTVLLHRLSTVSLDEVSLDERVESSVFLAQYEQERSLPDHVAKSAWSSLVQQIKQRNMKLGPVATLRQIAEKF IKNEKGGPKIDLPMFSEWQTLMSRVSCLPIMACHQVFNPGAASQEYSFRWPLYPYHPTVEDYITRECLHETHQHLNGSTS AEECWLDALKHPDVSVRDFEKGWASQEMKQLCAQIDPSLTPEIFKDRLQIACNIREILCRVAQGVELPEWIASMQYPQQL ADSTILHNGQEYGFATVWPTDDKYSQESEFCWLTGLLEKWRYNAPEGLERLLWVYLLMQNQYLTLLVQRDDFFGFDQFQN YTMTELREETEKSYLSRFKHAHGAGVYSQVRYLEGRFAPKSDPRKMQKLLFSVLRGYWEYLSAHMSLEWVHEKPLTMSQV LDNLELVEPHGKCAELALVPHFIKRKPKNGEVYPYALLFKELKNQAAILMDMLKSEPRLTGWIRGVDAAANEMHAPPELF SPLFRVLAKSGIAHFTYHVGEDFPHLISGIRSIDDALRFLPLRNGDRLGHCTAIGITPNIWKRSLPLSLSMTKETRLLDL VFIWRELRSHPELLRYASDAAIEAVRLAHKVFSLEEEVSITTLDQVFEMRGLLAESEGLLGELNGPLKPKSLWLEEYERA RELVKTTGMKRPLKLYKQWLTSDNVRKQRGEYVEVALEYLPDEAVVALQQAVMAKMADRNIAIECPPTSNTRISQYRDVS EHHIFRWMGLPGEAIEGDVPMSICLGSDDPGIFAADLKSEFYHLFIVLTRNFGLSPAEALGKVAEVNENGRIYRFHDVS
Sequences:
>Translated_799_residues MERFLLNSTVLLHRLSTVSLDEVSLDERVESSVFLAQYEQERSLPDHVAKSAWSSLVQQIKQRNMKLGPVATLRQIAEKF IKNEKGGPKIDLPMFSEWQTLMSRVSCLPIMACHQVFNPGAASQEYSFRWPLYPYHPTVEDYITRECLHETHQHLNGSTS AEECWLDALKHPDVSVRDFEKGWASQEMKQLCAQIDPSLTPEIFKDRLQIACNIREILCRVAQGVELPEWIASMQYPQQL ADSTILHNGQEYGFATVWPTDDKYSQESEFCWLTGLLEKWRYNAPEGLERLLWVYLLMQNQYLTLLVQRDDFFGFDQFQN YTMTELREETEKSYLSRFKHAHGAGVYSQVRYLEGRFAPKSDPRKMQKLLFSVLRGYWEYLSAHMSLEWVHEKPLTMSQV LDNLELVEPHGKCAELALVPHFIKRKPKNGEVYPYALLFKELKNQAAILMDMLKSEPRLTGWIRGVDAAANEMHAPPELF SPLFRVLAKSGIAHFTYHVGEDFPHLISGIRSIDDALRFLPLRNGDRLGHCTAIGITPNIWKRSLPLSLSMTKETRLLDL VFIWRELRSHPELLRYASDAAIEAVRLAHKVFSLEEEVSITTLDQVFEMRGLLAESEGLLGELNGPLKPKSLWLEEYERA RELVKTTGMKRPLKLYKQWLTSDNVRKQRGEYVEVALEYLPDEAVVALQQAVMAKMADRNIAIECPPTSNTRISQYRDVS EHHIFRWMGLPGEAIEGDVPMSICLGSDDPGIFAADLKSEFYHLFIVLTRNFGLSPAEALGKVAEVNENGRIYRFHDVS >Mature_799_residues MERFLLNSTVLLHRLSTVSLDEVSLDERVESSVFLAQYEQERSLPDHVAKSAWSSLVQQIKQRNMKLGPVATLRQIAEKF IKNEKGGPKIDLPMFSEWQTLMSRVSCLPIMACHQVFNPGAASQEYSFRWPLYPYHPTVEDYITRECLHETHQHLNGSTS AEECWLDALKHPDVSVRDFEKGWASQEMKQLCAQIDPSLTPEIFKDRLQIACNIREILCRVAQGVELPEWIASMQYPQQL ADSTILHNGQEYGFATVWPTDDKYSQESEFCWLTGLLEKWRYNAPEGLERLLWVYLLMQNQYLTLLVQRDDFFGFDQFQN YTMTELREETEKSYLSRFKHAHGAGVYSQVRYLEGRFAPKSDPRKMQKLLFSVLRGYWEYLSAHMSLEWVHEKPLTMSQV LDNLELVEPHGKCAELALVPHFIKRKPKNGEVYPYALLFKELKNQAAILMDMLKSEPRLTGWIRGVDAAANEMHAPPELF SPLFRVLAKSGIAHFTYHVGEDFPHLISGIRSIDDALRFLPLRNGDRLGHCTAIGITPNIWKRSLPLSLSMTKETRLLDL VFIWRELRSHPELLRYASDAAIEAVRLAHKVFSLEEEVSITTLDQVFEMRGLLAESEGLLGELNGPLKPKSLWLEEYERA RELVKTTGMKRPLKLYKQWLTSDNVRKQRGEYVEVALEYLPDEAVVALQQAVMAKMADRNIAIECPPTSNTRISQYRDVS EHHIFRWMGLPGEAIEGDVPMSICLGSDDPGIFAADLKSEFYHLFIVLTRNFGLSPAEALGKVAEVNENGRIYRFHDVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91916; Mature: 91916
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFLLNSTVLLHRLSTVSLDEVSLDERVESSVFLAQYEQERSLPDHVAKSAWSSLVQQI CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KQRNMKLGPVATLRQIAEKFIKNEKGGPKIDLPMFSEWQTLMSRVSCLPIMACHQVFNPG HHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC AASQEYSFRWPLYPYHPTVEDYITRECLHETHQHLNGSTSAEECWLDALKHPDVSVRDFE CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHH KGWASQEMKQLCAQIDPSLTPEIFKDRLQIACNIREILCRVAQGVELPEWIASMQYPQQL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ADSTILHNGQEYGFATVWPTDDKYSQESEFCWLTGLLEKWRYNAPEGLERLLWVYLLMQN HHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC QYLTLLVQRDDFFGFDQFQNYTMTELREETEKSYLSRFKHAHGAGVYSQVRYLEGRFAPK CEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC SDPRKMQKLLFSVLRGYWEYLSAHMSLEWVHEKPLTMSQVLDNLELVEPHGKCAELALVP CCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHCCCCEECCCCCHHHHHHHH HFIKRKPKNGEVYPYALLFKELKNQAAILMDMLKSEPRLTGWIRGVDAAANEMHAPPELF HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH SPLFRVLAKSGIAHFTYHVGEDFPHLISGIRSIDDALRFLPLRNGDRLGHCTAIGITPNI HHHHHHHHHCCHHHEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHH WKRSLPLSLSMTKETRLLDLVFIWRELRSHPELLRYASDAAIEAVRLAHKVFSLEEEVSI HHCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLDQVFEMRGLLAESEGLLGELNGPLKPKSLWLEEYERARELVKTTGMKRPLKLYKQWL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TSDNVRKQRGEYVEVALEYLPDEAVVALQQAVMAKMADRNIAIECPPTSNTRISQYRDVS CCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCHH EHHIFRWMGLPGEAIEGDVPMSICLGSDDPGIFAADLKSEFYHLFIVLTRNFGLSPAEAL HHHHHHEECCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHEEEEEECCCCCCHHHHH GKVAEVNENGRIYRFHDVS HHHHHCCCCCCEEEEECCC >Mature Secondary Structure MERFLLNSTVLLHRLSTVSLDEVSLDERVESSVFLAQYEQERSLPDHVAKSAWSSLVQQI CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KQRNMKLGPVATLRQIAEKFIKNEKGGPKIDLPMFSEWQTLMSRVSCLPIMACHQVFNPG HHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC AASQEYSFRWPLYPYHPTVEDYITRECLHETHQHLNGSTSAEECWLDALKHPDVSVRDFE CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHH KGWASQEMKQLCAQIDPSLTPEIFKDRLQIACNIREILCRVAQGVELPEWIASMQYPQQL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ADSTILHNGQEYGFATVWPTDDKYSQESEFCWLTGLLEKWRYNAPEGLERLLWVYLLMQN HHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC QYLTLLVQRDDFFGFDQFQNYTMTELREETEKSYLSRFKHAHGAGVYSQVRYLEGRFAPK CEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC SDPRKMQKLLFSVLRGYWEYLSAHMSLEWVHEKPLTMSQVLDNLELVEPHGKCAELALVP CCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHCCCCEECCCCCHHHHHHHH HFIKRKPKNGEVYPYALLFKELKNQAAILMDMLKSEPRLTGWIRGVDAAANEMHAPPELF HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH SPLFRVLAKSGIAHFTYHVGEDFPHLISGIRSIDDALRFLPLRNGDRLGHCTAIGITPNI HHHHHHHHHCCHHHEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHH WKRSLPLSLSMTKETRLLDLVFIWRELRSHPELLRYASDAAIEAVRLAHKVFSLEEEVSI HHCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLDQVFEMRGLLAESEGLLGELNGPLKPKSLWLEEYERARELVKTTGMKRPLKLYKQWL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TSDNVRKQRGEYVEVALEYLPDEAVVALQQAVMAKMADRNIAIECPPTSNTRISQYRDVS CCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCHH EHHIFRWMGLPGEAIEGDVPMSICLGSDDPGIFAADLKSEFYHLFIVLTRNFGLSPAEAL HHHHHHEECCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHEEEEEECCCCCCHHHHH GKVAEVNENGRIYRFHDVS HHHHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA