| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919925
Identifier: 238919925
GI number: 238919925
Start: 1954267
End: 1954614
Strand: Reverse
Name: 238919925
Synonym: NT01EI_2029
Alternate gene names: NA
Gene position: 1954614-1954267 (Counterclockwise)
Preceding gene: 238919926
Following gene: 238919924
Centisome position: 51.27
GC content: 68.68
Gene sequence:
>348_bases ATGGACGTGAAACCGAGCGTCAGTTTTCAAGAGCGTGCCAGCATCAACAACGGGCTGCGGGCGCTGAGCCGTGAGCGGGG CTGCGTTGGCGGCAGTACCCAGATGAGCCGCGTGATCATCGTCGCCGCCGGCGCCGACTGGCACACGCTGCGCGGCCTGG AGCGTCGCCTGCTGCAGCTGTTCCCGCGGGAGGGGGATACCCAGGCGGCCATCAGCGCCCGGCTGCGGCAGGTCAGCGTG CTGCGCCACGGGCTGGTCAAGCAGGTGCGCAAGGTGCGCAATCCCGACAGCGGCAAAACGGTCTGGTTTTACCGACTGGT GCCCGCCCGCCGCGATGGGAGCGTGTGA
Upstream 100 bases:
>100_bases AGGCGCGGCGGCTGTGTACTCCGATGGATCAGCCGCCGCTGGCAGCGCGTTACCGCGGCGCCAGAGTGTGAGCGCCGACA TGAGACAGGGAGGAGAGACG
Downstream 100 bases:
>100_bases TGGTGAAATTTTCGCCTGTGCGCCACGCTGCGGCGTTTTTAGGATATCAGCCATACCAACCCACGGCATTGATGGCTACG CCGCGCCTGAGCCATTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MDVKPSVSFQERASINNGLRALSRERGCVGGSTQMSRVIIVAAGADWHTLRGLERRLLQLFPREGDTQAAISARLRQVSV LRHGLVKQVRKVRNPDSGKTVWFYRLVPARRDGSV
Sequences:
>Translated_115_residues MDVKPSVSFQERASINNGLRALSRERGCVGGSTQMSRVIIVAAGADWHTLRGLERRLLQLFPREGDTQAAISARLRQVSV LRHGLVKQVRKVRNPDSGKTVWFYRLVPARRDGSV >Mature_115_residues MDVKPSVSFQERASINNGLRALSRERGCVGGSTQMSRVIIVAAGADWHTLRGLERRLLQLFPREGDTQAAISARLRQVSV LRHGLVKQVRKVRNPDSGKTVWFYRLVPARRDGSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12866; Mature: 12866
Theoretical pI: Translated: 12.14; Mature: 12.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKPSVSFQERASINNGLRALSRERGCVGGSTQMSRVIIVAAGADWHTLRGLERRLLQL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH FPREGDTQAAISARLRQVSVLRHGLVKQVRKVRNPDSGKTVWFYRLVPARRDGSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MDVKPSVSFQERASINNGLRALSRERGCVGGSTQMSRVIIVAAGADWHTLRGLERRLLQL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH FPREGDTQAAISARLRQVSVLRHGLVKQVRKVRNPDSGKTVWFYRLVPARRDGSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA