Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919912

Identifier: 238919912

GI number: 238919912

Start: 1946116

End: 1946445

Strand: Reverse

Name: 238919912

Synonym: NT01EI_2016

Alternate gene names: NA

Gene position: 1946445-1946116 (Counterclockwise)

Preceding gene: 238919913

Following gene: 238919911

Centisome position: 51.06

GC content: 46.06

Gene sequence:

>330_bases
ATGTCCGAAGGACCAAACGCCAGTGAGATAGCGGTTTATCAGAGTCGGCGGTTTGAGAAAGCACTGGATAAGCTCTCGGT
ATCTCAGCTGGCACGGGTTGAAGATGAGATCGATAAAATTATCGCCGATCCCGAGCTTGGTGAGCTGAAAAAGGGAGATT
TAAGCTTTCTGCGGGTGCATAAGTTTACGCTGAATAATCATCTAGTGCTGTTGGGATACAGCTGGCAGTCAAAACGGGTA
GAACTGTATCTATTAACGATCGGACCTCACGAAAATTTTTACCGTGAACAGAAGCAGCATCGTAAAGCGGATTTGAAGCT
CATTGGCTAA

Upstream 100 bases:

>100_bases
ATTGGCCGGATAGCCGAGGATAATCCAGATTTACCTTACAGTTTTATCAGTGAGGTGTTGTTGGCGCAGAGTGAGGTCAA
TAACCAGAAGGTGACGCGCT

Downstream 100 bases:

>100_bases
CACCGATATATTTTTCCAAATAACAGACCCTGGCGAATGCCGGGTTTTTTTTTATCCAAATTTCCCCAGCGCGGGGTAAT
GAGATGGCACATATGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSEGPNASEIAVYQSRRFEKALDKLSVSQLARVEDEIDKIIADPELGELKKGDLSFLRVHKFTLNNHLVLLGYSWQSKRV
ELYLLTIGPHENFYREQKQHRKADLKLIG

Sequences:

>Translated_109_residues
MSEGPNASEIAVYQSRRFEKALDKLSVSQLARVEDEIDKIIADPELGELKKGDLSFLRVHKFTLNNHLVLLGYSWQSKRV
ELYLLTIGPHENFYREQKQHRKADLKLIG
>Mature_108_residues
SEGPNASEIAVYQSRRFEKALDKLSVSQLARVEDEIDKIIADPELGELKKGDLSFLRVHKFTLNNHLVLLGYSWQSKRVE
LYLLTIGPHENFYREQKQHRKADLKLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12623; Mature: 12491

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGPNASEIAVYQSRRFEKALDKLSVSQLARVEDEIDKIIADPELGELKKGDLSFLRVH
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
KFTLNNHLVLLGYSWQSKRVELYLLTIGPHENFYREQKQHRKADLKLIG
EEECCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
SEGPNASEIAVYQSRRFEKALDKLSVSQLARVEDEIDKIIADPELGELKKGDLSFLRVH
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
KFTLNNHLVLLGYSWQSKRVELYLLTIGPHENFYREQKQHRKADLKLIG
EEECCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA