Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919910

Identifier: 238919910

GI number: 238919910

Start: 1945131

End: 1945682

Strand: Reverse

Name: 238919910

Synonym: NT01EI_2014

Alternate gene names: NA

Gene position: 1945682-1945131 (Counterclockwise)

Preceding gene: 238919911

Following gene: 238919909

Centisome position: 51.04

GC content: 62.68

Gene sequence:

>552_bases
ATGGCACTCACCAAGGATCACATCTTCGATGTCCTGCTGGGGCGCGAAGGAGGATACGTCGATCACCCTAACGACACAGG
GGGGCCAACCAACTGGGGGATCACCGAGAAGGTGGCGCGTGCCCATGGCTATACCGGCGATATGCGTAACCTGACGCGGG
CGCAGGCGCTGGAAATCTATGAGAGCGACTATTGGTCAGGTCCCCGTTTTGACCTGGTGGCGGACTATTCCGCGCTGGTG
GCCGCCGAGCTGTGCGATACCGGCGTCAACATGGGGCCGTCGGTGCCCAGTAAGTGGCTGCAGCGCTGGCTGACCGCCTT
TAACGATGGCGGGCGCTTGTACCCGGATATCAGCGCCGATGGGGTGATCGGGCCACGTACGCTCTCTGCGCTGCGTGCCT
ATCTGGATGCCCGGGGAGAAGAGGGTGAACAGGTGCTGCTGCGGGCGCTGAACTGCAGTCAGGGCGATCGTTATCTGGCG
CTGGCCGAGCAGCGGGTGCAGAACGAGTCGTTTCTGTATGGTTGGGTTCGGGAGCGGGTGACGCTGTCCTAG

Upstream 100 bases:

>100_bases
GCGGTGCCATTGGCTTTATCGGTGTGCAGCAGATCCAGCGTTTTGCGATGTATATCCTGCAGCGCAAACTGGGAATATCA
ACAGACAGGGAGCGGTAATT

Downstream 100 bases:

>100_bases
CGACAGATGGATCCAGAATGCCCATCTAAAAATAGTGAACAGTTCGATGGTGGGATGATGCGAAATCCTGTCAATACGCA
TTGCATGAAATAAAGCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MALTKDHIFDVLLGREGGYVDHPNDTGGPTNWGITEKVARAHGYTGDMRNLTRAQALEIYESDYWSGPRFDLVADYSALV
AAELCDTGVNMGPSVPSKWLQRWLTAFNDGGRLYPDISADGVIGPRTLSALRAYLDARGEEGEQVLLRALNCSQGDRYLA
LAEQRVQNESFLYGWVRERVTLS

Sequences:

>Translated_183_residues
MALTKDHIFDVLLGREGGYVDHPNDTGGPTNWGITEKVARAHGYTGDMRNLTRAQALEIYESDYWSGPRFDLVADYSALV
AAELCDTGVNMGPSVPSKWLQRWLTAFNDGGRLYPDISADGVIGPRTLSALRAYLDARGEEGEQVLLRALNCSQGDRYLA
LAEQRVQNESFLYGWVRERVTLS
>Mature_182_residues
ALTKDHIFDVLLGREGGYVDHPNDTGGPTNWGITEKVARAHGYTGDMRNLTRAQALEIYESDYWSGPRFDLVADYSALVA
AELCDTGVNMGPSVPSKWLQRWLTAFNDGGRLYPDISADGVIGPRTLSALRAYLDARGEEGEQVLLRALNCSQGDRYLAL
AEQRVQNESFLYGWVRERVTLS

Specific function: Unknown

COG id: COG3926

COG function: function code R; Putative secretion activating protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20330; Mature: 20199

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTKDHIFDVLLGREGGYVDHPNDTGGPTNWGITEKVARAHGYTGDMRNLTRAQALEIY
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
ESDYWSGPRFDLVADYSALVAAELCDTGVNMGPSVPSKWLQRWLTAFNDGGRLYPDISAD
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCC
GVIGPRTLSALRAYLDARGEEGEQVLLRALNCSQGDRYLALAEQRVQNESFLYGWVRERV
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
TLS
CCC
>Mature Secondary Structure 
ALTKDHIFDVLLGREGGYVDHPNDTGGPTNWGITEKVARAHGYTGDMRNLTRAQALEIY
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
ESDYWSGPRFDLVADYSALVAAELCDTGVNMGPSVPSKWLQRWLTAFNDGGRLYPDISAD
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCC
GVIGPRTLSALRAYLDARGEEGEQVLLRALNCSQGDRYLALAEQRVQNESFLYGWVRERV
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
TLS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA