Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919906

Identifier: 238919906

GI number: 238919906

Start: 1939747

End: 1941861

Strand: Reverse

Name: 238919906

Synonym: NT01EI_2010

Alternate gene names: NA

Gene position: 1941861-1939747 (Counterclockwise)

Preceding gene: 238919907

Following gene: 238919903

Centisome position: 50.94

GC content: 61.99

Gene sequence:

>2115_bases
ATGACCGATCCCTTTTCTTCCCCGGATATTTCGACGGCGCCCGATCGTCAGGGCCAGTTCACCCTGGCTCAGCTGCTGTC
TATCACGGCCGATATTCATCATCAGCCGGATTGGCGTTCGGCGGCCAATAAGGCCTGTGCCTACTATGACGGCGAGCAGC
TGCCGCCGGAGCTGATTGCCACGCTGCTGGAGCGCAGTCAGCCGTTGACCATGCATAACCTGATCGCGCCGACGGTAGAC
GGCGTGCTGGGCATGGAGGCCAAAACCCGCACCGAGCTGATGGTGGTAGCCGATGATCCGCAGCCGGAGTTTGAGGCATT
GGCCGAGGCGGTGAATGCCGAGTTCGCCGATGCCTGTCGCCTGGCCAATCTGGGCAAGGCGCGCAGCGATGCCTATGCCG
GTATGTTAAAAGCCGGGCTGGAATGGGTGGAGGTGCGGCGCAGCGACAATATCTTTGGGCCGCGCTATAGGGCGGGTACG
GTACACCGCAACGAGGTGTATTGGGATTGGCACAGCCGGGAGCCGGATCTGAGCGACTGCCGCTGGCTGCTGCGTCGCCG
CTGGATGGATTTGGACGAGGCACTGGCCACGTTCCCCGCCAAGGCAGCGATACTCCAGAATGCCCGTATGGATTGGCGCG
GTTTTATCGATACCGGGCTGGCCGAGGGGCTGGATGCCGATCTGGTCGCGGCCTATGAGGAGTATCAGCAGTACAGCCGC
AGGGAGCTGGAGTGGTTGAGCAGCGATCGGCAGCGGGTGCTGCTGCAGGTGGTTTACTATCGTAGCTGGGTGACGTTGCC
GGTGATGACGTTGGCCAACGGACGCGCCCTTGAGTATCAGGCTGAAAACCCACTGCACGCCGCGGCACTGGCGATGGGGA
GAGTGCAGGTACAGATGGCGCGCAGCAGCCGTATCCGCGAGGCCTGGTTTGCGGGGCCGCACCAGTTGGTGGATAGGCCC
TGCACGGCGCCGCAGGGGATGTTTCCGCTGATCCCGTTCTGGGGCTACCGCAAAGATCGCAACGGGGCCCCCTATGGTCT
GGTCAGCCGGGCGATACCGGCGCAGGACGAGGTGAATTTCCGGCGGATTAAGCTGACGTTTTTACTGACCGCTAAGCGGG
TCATCATGGATGATGATGCGGTGAATATGAGTCGGAAGCAGGTGCAGGAAGAGGTGGAGCGGCCGGATGGACTGATTATT
CTGAACCCCGATCGCCGCAATAAGACCACCATCGCCCAGTCGCTGGAGGTGCAGCAGGACTTTCAGGTGGCGCAGCAGCA
GTTTCAGGTGATGCAGGACTCCATGAAGCTGATCCAGGATGGCATGGGGGTCTATTCCGCCTTTCTGGGGCAGAACTCTA
ACGCCACCTCCGGCGTGGCCATCAGTAATCTGGTCGAGCAGGGGGCGACCACCCTGGCCGAGCTGAATGACAACTATCAG
TTCGCCTGCCAGCAGGTCGGGCAGCTGCTGTTGGGCTATCTGTTGGAGGATTTGGCACAGGTGCGTAACCACACCATTGT
CGTGAACCGTGACGATGCGCGCCGGCGGAAAAGCGTGGCGATCAATGTTGAGGGGCGCGACGGCATGAGTAATGATATTG
CCCGTCTGCGCGCCCATATTGCGCTGGCGCCGATCCAGCAGACGCCAGCCTACCGTTCTCAGCTGGCGGAGCGGCTGGGG
CAGGTGGTGGCTGGTCTGCCGCCGCAGGTGCAGGCGGCGGTGCTGGATCTGTGGATTTCGCTGCTGGATATTCCCAATAA
GAGCGAGTTTGTCGAGCGGATCCGTCAGGCGGTGGGCATGGCCAAGTCAGCCGATGAGATGACGCCGGAGGAGCAGGAGG
CGGCCGCCCAGCAGCAGCAGGTGGAGCAGCAACAGCTGGCGCTGGCGATGCGCGAACTGGAGGCCAAGGTGGGTAAACTG
GAGGCCGAAGCCCAGCGTGCGGCGGCGTCGGCGCAGCGTGAGCAGGCACAGGCCGAGGGGCAGCGCTTCCATGATATGAA
AACACAGGCGGAAACAGGGCAGATTTTGCAGGGAATGCAGCAGGATGCTCAGGTGGCCCGTCAGCAGTTGTTAACCCTTA
TCGAGCAGCAGATTGCCGCGCTGCCATTGCATTAG

Upstream 100 bases:

>100_bases
AGGTCATGAGCTATGCCCTGGCCCAGGAGATGCGCGCCCGGATGCCGGCGCGCAGACAGCCGGAGCCCATTAAACATCAG
CCAGCCCACTGGATGACCCG

Downstream 100 bases:

>100_bases
GGTAAAAAGTGAGCTAATTTGCGAACGATGACCCGCCTCGCACTTTTTGCGGGTTTTTTGTTTTTAGGTGGCTAACGACT
GTCTGCCGCTTGGTACACCT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Portal Protein; Phage Associated Protein

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MTDPFSSPDISTAPDRQGQFTLAQLLSITADIHHQPDWRSAANKACAYYDGEQLPPELIATLLERSQPLTMHNLIAPTVD
GVLGMEAKTRTELMVVADDPQPEFEALAEAVNAEFADACRLANLGKARSDAYAGMLKAGLEWVEVRRSDNIFGPRYRAGT
VHRNEVYWDWHSREPDLSDCRWLLRRRWMDLDEALATFPAKAAILQNARMDWRGFIDTGLAEGLDADLVAAYEEYQQYSR
RELEWLSSDRQRVLLQVVYYRSWVTLPVMTLANGRALEYQAENPLHAAALAMGRVQVQMARSSRIREAWFAGPHQLVDRP
CTAPQGMFPLIPFWGYRKDRNGAPYGLVSRAIPAQDEVNFRRIKLTFLLTAKRVIMDDDAVNMSRKQVQEEVERPDGLII
LNPDRRNKTTIAQSLEVQQDFQVAQQQFQVMQDSMKLIQDGMGVYSAFLGQNSNATSGVAISNLVEQGATTLAELNDNYQ
FACQQVGQLLLGYLLEDLAQVRNHTIVVNRDDARRRKSVAINVEGRDGMSNDIARLRAHIALAPIQQTPAYRSQLAERLG
QVVAGLPPQVQAAVLDLWISLLDIPNKSEFVERIRQAVGMAKSADEMTPEEQEAAAQQQQVEQQQLALAMRELEAKVGKL
EAEAQRAAASAQREQAQAEGQRFHDMKTQAETGQILQGMQQDAQVARQQLLTLIEQQIAALPLH

Sequences:

>Translated_704_residues
MTDPFSSPDISTAPDRQGQFTLAQLLSITADIHHQPDWRSAANKACAYYDGEQLPPELIATLLERSQPLTMHNLIAPTVD
GVLGMEAKTRTELMVVADDPQPEFEALAEAVNAEFADACRLANLGKARSDAYAGMLKAGLEWVEVRRSDNIFGPRYRAGT
VHRNEVYWDWHSREPDLSDCRWLLRRRWMDLDEALATFPAKAAILQNARMDWRGFIDTGLAEGLDADLVAAYEEYQQYSR
RELEWLSSDRQRVLLQVVYYRSWVTLPVMTLANGRALEYQAENPLHAAALAMGRVQVQMARSSRIREAWFAGPHQLVDRP
CTAPQGMFPLIPFWGYRKDRNGAPYGLVSRAIPAQDEVNFRRIKLTFLLTAKRVIMDDDAVNMSRKQVQEEVERPDGLII
LNPDRRNKTTIAQSLEVQQDFQVAQQQFQVMQDSMKLIQDGMGVYSAFLGQNSNATSGVAISNLVEQGATTLAELNDNYQ
FACQQVGQLLLGYLLEDLAQVRNHTIVVNRDDARRRKSVAINVEGRDGMSNDIARLRAHIALAPIQQTPAYRSQLAERLG
QVVAGLPPQVQAAVLDLWISLLDIPNKSEFVERIRQAVGMAKSADEMTPEEQEAAAQQQQVEQQQLALAMRELEAKVGKL
EAEAQRAAASAQREQAQAEGQRFHDMKTQAETGQILQGMQQDAQVARQQLLTLIEQQIAALPLH
>Mature_703_residues
TDPFSSPDISTAPDRQGQFTLAQLLSITADIHHQPDWRSAANKACAYYDGEQLPPELIATLLERSQPLTMHNLIAPTVDG
VLGMEAKTRTELMVVADDPQPEFEALAEAVNAEFADACRLANLGKARSDAYAGMLKAGLEWVEVRRSDNIFGPRYRAGTV
HRNEVYWDWHSREPDLSDCRWLLRRRWMDLDEALATFPAKAAILQNARMDWRGFIDTGLAEGLDADLVAAYEEYQQYSRR
ELEWLSSDRQRVLLQVVYYRSWVTLPVMTLANGRALEYQAENPLHAAALAMGRVQVQMARSSRIREAWFAGPHQLVDRPC
TAPQGMFPLIPFWGYRKDRNGAPYGLVSRAIPAQDEVNFRRIKLTFLLTAKRVIMDDDAVNMSRKQVQEEVERPDGLIIL
NPDRRNKTTIAQSLEVQQDFQVAQQQFQVMQDSMKLIQDGMGVYSAFLGQNSNATSGVAISNLVEQGATTLAELNDNYQF
ACQQVGQLLLGYLLEDLAQVRNHTIVVNRDDARRRKSVAINVEGRDGMSNDIARLRAHIALAPIQQTPAYRSQLAERLGQ
VVAGLPPQVQAAVLDLWISLLDIPNKSEFVERIRQAVGMAKSADEMTPEEQEAAAQQQQVEQQQLALAMRELEAKVGKLE
AEAQRAAASAQREQAQAEGQRFHDMKTQAETGQILQGMQQDAQVARQQLLTLIEQQIAALPLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79035; Mature: 78903

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPFSSPDISTAPDRQGQFTLAQLLSITADIHHQPDWRSAANKACAYYDGEQLPPELIA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCCCHHHHH
TLLERSQPLTMHNLIAPTVDGVLGMEAKTRTELMVVADDPQPEFEALAEAVNAEFADACR
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHH
LANLGKARSDAYAGMLKAGLEWVEVRRSDNIFGPRYRAGTVHRNEVYWDWHSREPDLSDC
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEECCCCCCCHHHH
RWLLRRRWMDLDEALATFPAKAAILQNARMDWRGFIDTGLAEGLDADLVAAYEEYQQYSR
HHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RELEWLSSDRQRVLLQVVYYRSWVTLPVMTLANGRALEYQAENPLHAAALAMGRVQVQMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
RSSRIREAWFAGPHQLVDRPCTAPQGMFPLIPFWGYRKDRNGAPYGLVSRAIPAQDEVNF
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCE
RRIKLTFLLTAKRVIMDDDAVNMSRKQVQEEVERPDGLIILNPDRRNKTTIAQSLEVQQD
EEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHH
FQVAQQQFQVMQDSMKLIQDGMGVYSAFLGQNSNATSGVAISNLVEQGATTLAELNDNYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
FACQQVGQLLLGYLLEDLAQVRNHTIVVNRDDARRRKSVAINVEGRDGMSNDIARLRAHI
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCEEEEECCCCCCHHHHHHHHHHH
ALAPIQQTPAYRSQLAERLGQVVAGLPPQVQAAVLDLWISLLDIPNKSEFVERIRQAVGM
HHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
AKSADEMTPEEQEAAAQQQQVEQQQLALAMRELEAKVGKLEAEAQRAAASAQREQAQAEG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFHDMKTQAETGQILQGMQQDAQVARQQLLTLIEQQIAALPLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDPFSSPDISTAPDRQGQFTLAQLLSITADIHHQPDWRSAANKACAYYDGEQLPPELIA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCCCHHHHH
TLLERSQPLTMHNLIAPTVDGVLGMEAKTRTELMVVADDPQPEFEALAEAVNAEFADACR
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHH
LANLGKARSDAYAGMLKAGLEWVEVRRSDNIFGPRYRAGTVHRNEVYWDWHSREPDLSDC
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEECCCCCCCHHHH
RWLLRRRWMDLDEALATFPAKAAILQNARMDWRGFIDTGLAEGLDADLVAAYEEYQQYSR
HHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RELEWLSSDRQRVLLQVVYYRSWVTLPVMTLANGRALEYQAENPLHAAALAMGRVQVQMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
RSSRIREAWFAGPHQLVDRPCTAPQGMFPLIPFWGYRKDRNGAPYGLVSRAIPAQDEVNF
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCE
RRIKLTFLLTAKRVIMDDDAVNMSRKQVQEEVERPDGLIILNPDRRNKTTIAQSLEVQQD
EEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHH
FQVAQQQFQVMQDSMKLIQDGMGVYSAFLGQNSNATSGVAISNLVEQGATTLAELNDNYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
FACQQVGQLLLGYLLEDLAQVRNHTIVVNRDDARRRKSVAINVEGRDGMSNDIARLRAHI
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCEEEEECCCCCCHHHHHHHHHHH
ALAPIQQTPAYRSQLAERLGQVVAGLPPQVQAAVLDLWISLLDIPNKSEFVERIRQAVGM
HHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
AKSADEMTPEEQEAAAQQQQVEQQQLALAMRELEAKVGKLEAEAQRAAASAQREQAQAEG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRFHDMKTQAETGQILQGMQQDAQVARQQLLTLIEQQIAALPLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA