Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919894

Identifier: 238919894

GI number: 238919894

Start: 1930263

End: 1931831

Strand: Reverse

Name: 238919894

Synonym: NT01EI_1998

Alternate gene names: NA

Gene position: 1931831-1930263 (Counterclockwise)

Preceding gene: 238919896

Following gene: 238919893

Centisome position: 50.67

GC content: 58.76

Gene sequence:

>1569_bases
TTGCCAGAAACCAATGCCACCCTGGCACAAAACTGTCATTTTCGGCACGGCGTCATCACTCCACTTTATATGGATAAAGA
CGAGGCGATCCCGTTTTCTCTCGATCCTCAGACGCTGTTCCATTACCGGGATGATGTCTGGTTTACCTGGGCCGGGCGGG
TTCAGGCCATACGTAGCCCGGTGGCGCAGGATCAGTATGACCGGGTCTATTTTACCGATGGTCGGCATCCACAGGTCACC
AGTGCCCAGATTGCCTCTCAGGGCCACGGACGCTATCCGGCGGCCAGTTATCGGCTTGGTATCCCGGCCCCCGAGCACCC
GCCGACGATTGGTGAAATCCATTATCCGGAGGATGAGCAGCCAAATGATCCACTGGATGACGAAACGCGGTTTTATGTGG
AAACCTACGTCACTGCCTATGGGGAAGAGGGGCCGCCTGGACCGGTATCCAGAGAGGTGAGTATTCCCTATCCCGGTAGC
CGAGTGACGCTGCATCTAGCCCCCTTGATTGCCCAAAACCATAACATTTCCCGTCGCCGGATTTATCGTACCGTTACCGG
CGGTGGGGCTGCGGATTATCTGCTTGTTACGGAGCTGGCTCTTGGCCAGGAAAGCTATGTTGATGCCTTACCTTCTGCTG
AGTTGGGCGGTGTGCTGGAAACCTATGACTATCTGATGCCACCGGACAATATGGTGGGGCTGTGTTTGATGGCGAACGGC
ATCGCGGCTGCTTTTGCCGGTAATGAGGTGATGTTTTCAGAGCCCTATTTACCCTACGCCTGGCCGGGTGCCTATAGACA
GAGTACCGAGCATAATATTGTGGCCATTGCCGCGTTGGGTACTGTGCTGGTGGTGGTGACACAAGGGTACGCCTATCTGT
TCAGCGGCGTCTCGCCGGGCAGCATGACCAGCAGCAAACTACCGATTATGCAGGCGTGTCTCAGCACTGACAGCATGGTA
GAGATGGATGGCTTTGTGCTGTATGCCGCGGCCAATGGGCTGGTGTCCGTCGATGCTGCCGGCAATGCCCTGGTGGCAAC
GGAAGCGATTGTTGAGCCACGTCAGTGGCGCCAGGGCTTTCACCCTGAGACTATCCGCGCCTGGCGGGTGGAGGGCGAGT
ATTTTGCTCTGTATCGGGATGCGCGGGATCGCCCCGCAGGATTTATTTTCGATCCGCGGGCGATGGATCTACGCCGTGTG
GATACCGACTTTGCGTGCGCCGGTTATCGACTGGAGAACGAACAGCTGTATGTGGTCAGGCGGCGGCAGCTGTATCAGCT
GCAGCAGGGGACACAGCCCCACCAGATGCGGTGGCGATCCCGGGTGTTTCTGGCCCACGCCGCGGTGTCGTTTGCGTGCC
TGCGGGTGCTCAGTCCCCAGTTGCTGCGGGTGGGGGTCCAGATTGTGATTGACGGTGAGGTGGCGTTCAGCCTGCCGCCT
GGCGCACTGACGGAGCCCTGCGTGAAGCTGCCGGTACTGTCCGGCCGTCGCTGGCAGATCGAGTGCTTTGGTACCGCTCA
GGTCGAGCGCCTGACGCTGAGCACATCGATGGATACGCTGCCGCCATGA

Upstream 100 bases:

>100_bases
AATACTGAGCTGCATCAGTTTATAAGTGCTTCCGATAACGATGTCCTCGATTGATATTTCCCTGATGCGCGGTGAACAGC
CCCGGATCGTTAGCCACCTT

Downstream 100 bases:

>100_bases
GTAAACGCCACACGTTTCGCGCCGGACGCAGTCTGGACGCGCTGTATGAGAACGTTGAACTGATGACCGGGCAGCGCGGT
GATGGGCAGGATAAGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MPETNATLAQNCHFRHGVITPLYMDKDEAIPFSLDPQTLFHYRDDVWFTWAGRVQAIRSPVAQDQYDRVYFTDGRHPQVT
SAQIASQGHGRYPAASYRLGIPAPEHPPTIGEIHYPEDEQPNDPLDDETRFYVETYVTAYGEEGPPGPVSREVSIPYPGS
RVTLHLAPLIAQNHNISRRRIYRTVTGGGAADYLLVTELALGQESYVDALPSAELGGVLETYDYLMPPDNMVGLCLMANG
IAAAFAGNEVMFSEPYLPYAWPGAYRQSTEHNIVAIAALGTVLVVVTQGYAYLFSGVSPGSMTSSKLPIMQACLSTDSMV
EMDGFVLYAAANGLVSVDAAGNALVATEAIVEPRQWRQGFHPETIRAWRVEGEYFALYRDARDRPAGFIFDPRAMDLRRV
DTDFACAGYRLENEQLYVVRRRQLYQLQQGTQPHQMRWRSRVFLAHAAVSFACLRVLSPQLLRVGVQIVIDGEVAFSLPP
GALTEPCVKLPVLSGRRWQIECFGTAQVERLTLSTSMDTLPP

Sequences:

>Translated_522_residues
MPETNATLAQNCHFRHGVITPLYMDKDEAIPFSLDPQTLFHYRDDVWFTWAGRVQAIRSPVAQDQYDRVYFTDGRHPQVT
SAQIASQGHGRYPAASYRLGIPAPEHPPTIGEIHYPEDEQPNDPLDDETRFYVETYVTAYGEEGPPGPVSREVSIPYPGS
RVTLHLAPLIAQNHNISRRRIYRTVTGGGAADYLLVTELALGQESYVDALPSAELGGVLETYDYLMPPDNMVGLCLMANG
IAAAFAGNEVMFSEPYLPYAWPGAYRQSTEHNIVAIAALGTVLVVVTQGYAYLFSGVSPGSMTSSKLPIMQACLSTDSMV
EMDGFVLYAAANGLVSVDAAGNALVATEAIVEPRQWRQGFHPETIRAWRVEGEYFALYRDARDRPAGFIFDPRAMDLRRV
DTDFACAGYRLENEQLYVVRRRQLYQLQQGTQPHQMRWRSRVFLAHAAVSFACLRVLSPQLLRVGVQIVIDGEVAFSLPP
GALTEPCVKLPVLSGRRWQIECFGTAQVERLTLSTSMDTLPP
>Mature_521_residues
PETNATLAQNCHFRHGVITPLYMDKDEAIPFSLDPQTLFHYRDDVWFTWAGRVQAIRSPVAQDQYDRVYFTDGRHPQVTS
AQIASQGHGRYPAASYRLGIPAPEHPPTIGEIHYPEDEQPNDPLDDETRFYVETYVTAYGEEGPPGPVSREVSIPYPGSR
VTLHLAPLIAQNHNISRRRIYRTVTGGGAADYLLVTELALGQESYVDALPSAELGGVLETYDYLMPPDNMVGLCLMANGI
AAAFAGNEVMFSEPYLPYAWPGAYRQSTEHNIVAIAALGTVLVVVTQGYAYLFSGVSPGSMTSSKLPIMQACLSTDSMVE
MDGFVLYAAANGLVSVDAAGNALVATEAIVEPRQWRQGFHPETIRAWRVEGEYFALYRDARDRPAGFIFDPRAMDLRRVD
TDFACAGYRLENEQLYVVRRRQLYQLQQGTQPHQMRWRSRVFLAHAAVSFACLRVLSPQLLRVGVQIVIDGEVAFSLPPG
ALTEPCVKLPVLSGRRWQIECFGTAQVERLTLSTSMDTLPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57999; Mature: 57868

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETNATLAQNCHFRHGVITPLYMDKDEAIPFSLDPQTLFHYRDDVWFTWAGRVQAIRSP
CCCCCCCHHHCCEECCCCCCEEEECCCCCCCCCCCHHHHHEECCCEEEEECCHHHHHHCC
VAQDQYDRVYFTDGRHPQVTSAQIASQGHGRYPAASYRLGIPAPEHPPTIGEIHYPEDEQ
CCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCC
PNDPLDDETRFYVETYVTAYGEEGPPGPVSREVSIPYPGSRVTLHLAPLIAQNHNISRRR
CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCCHHE
IYRTVTGGGAADYLLVTELALGQESYVDALPSAELGGVLETYDYLMPPDNMVGLCLMANG
EEEEECCCCCCHHHEEHHHHCCCHHHHHCCCCHHHCCHHHHHHCCCCCCCCEEEEEECCC
IAAAFAGNEVMFSEPYLPYAWPGAYRQSTEHNIVAIAALGTVLVVVTQGYAYLFSGVSPG
EEEEECCCEEEEECCCCCCCCCCHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEECCCCCC
SMTSSKLPIMQACLSTDSMVEMDGFVLYAAANGLVSVDAAGNALVATEAIVEPRQWRQGF
CCCCCCCHHHHHHHCCCCEEECCCEEEEEECCCEEEEECCCCEEEEHHHHCCCHHHHCCC
HPETIRAWRVEGEYFALYRDARDRPAGFIFDPRAMDLRRVDTDFACAGYRLENEQLYVVR
CCCCEEEEEECCCEEEEEECCCCCCCCEEECCCCCCHHHCCCCCEEECEEECCCCEEEEH
RRQLYQLQQGTQPHQMRWRSRVFLAHAAVSFACLRVLSPQLLRVGVQIVIDGEVAFSLPP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECEEEEECCEEEEECCC
GALTEPCVKLPVLSGRRWQIECFGTAQVERLTLSTSMDTLPP
CCCCCCHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PETNATLAQNCHFRHGVITPLYMDKDEAIPFSLDPQTLFHYRDDVWFTWAGRVQAIRSP
CCCCCCHHHCCEECCCCCCEEEECCCCCCCCCCCHHHHHEECCCEEEEECCHHHHHHCC
VAQDQYDRVYFTDGRHPQVTSAQIASQGHGRYPAASYRLGIPAPEHPPTIGEIHYPEDEQ
CCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEECCCCCC
PNDPLDDETRFYVETYVTAYGEEGPPGPVSREVSIPYPGSRVTLHLAPLIAQNHNISRRR
CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCCHHE
IYRTVTGGGAADYLLVTELALGQESYVDALPSAELGGVLETYDYLMPPDNMVGLCLMANG
EEEEECCCCCCHHHEEHHHHCCCHHHHHCCCCHHHCCHHHHHHCCCCCCCCEEEEEECCC
IAAAFAGNEVMFSEPYLPYAWPGAYRQSTEHNIVAIAALGTVLVVVTQGYAYLFSGVSPG
EEEEECCCEEEEECCCCCCCCCCHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEECCCCCC
SMTSSKLPIMQACLSTDSMVEMDGFVLYAAANGLVSVDAAGNALVATEAIVEPRQWRQGF
CCCCCCCHHHHHHHCCCCEEECCCEEEEEECCCEEEEECCCCEEEEHHHHCCCHHHHCCC
HPETIRAWRVEGEYFALYRDARDRPAGFIFDPRAMDLRRVDTDFACAGYRLENEQLYVVR
CCCCEEEEEECCCEEEEEECCCCCCCCEEECCCCCCHHHCCCCCEEECEEECCCCEEEEH
RRQLYQLQQGTQPHQMRWRSRVFLAHAAVSFACLRVLSPQLLRVGVQIVIDGEVAFSLPP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECEEEEECCEEEEECCC
GALTEPCVKLPVLSGRRWQIECFGTAQVERLTLSTSMDTLPP
CCCCCCHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA