| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919890
Identifier: 238919890
GI number: 238919890
Start: 1927306
End: 1927686
Strand: Reverse
Name: 238919890
Synonym: NT01EI_1994
Alternate gene names: NA
Gene position: 1927686-1927306 (Counterclockwise)
Preceding gene: 238919891
Following gene: 238919889
Centisome position: 50.56
GC content: 56.17
Gene sequence:
>381_bases ATGGGATGGGCATCTGATACTTATGCCGATTTGACCCGGCAGCAATACCAGGACTGGAAAAACCGGTTTTATCCGCAGCT GAAAAAAATGATGGATTATGCCGCGGGCGATCGACTGTTAAGCGATCAGCTTTTCCGGGCAGATAGGAATACCCAGAGCT CACTGCGCTCGGCATTGAGCGGGCAGGTAAATCAGATGGCTCGCTATGGCACGCCGGTGGCCCGTGATCCACAGGACAAT AGCCTGGGACTGCGTACTGCGCTGGCCCATGCCGGCGCCAAAAACAGTATTCGCGATGCGGCAGAGGATCGTCAGCTGAA TATCCTGACCGGAGGTTCCGCGGGCGTACGTGAACAGATGAGGGTGGGGGGCAGCACATAA
Upstream 100 bases:
>100_bases AAAGGATGCGTAGCGCGCAGATCTCCGGGACATGGGGGCTTACCCGGTGTGCCGTAAAGTTCCGTCCTTCAGGGCGGGGA GGATGTCAAAGGAGGACGCG
Downstream 100 bases:
>100_bases TGGGATATGGGCTAATCGATGTGGGCAGCCAGGCCCGCAGCCAGGCTGTACAGGGTGTAAGACAGAGTTCTGATCGCGAG AGGCAGCGCGAGATGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MGWASDTYADLTRQQYQDWKNRFYPQLKKMMDYAAGDRLLSDQLFRADRNTQSSLRSALSGQVNQMARYGTPVARDPQDN SLGLRTALAHAGAKNSIRDAAEDRQLNILTGGSAGVREQMRVGGST
Sequences:
>Translated_126_residues MGWASDTYADLTRQQYQDWKNRFYPQLKKMMDYAAGDRLLSDQLFRADRNTQSSLRSALSGQVNQMARYGTPVARDPQDN SLGLRTALAHAGAKNSIRDAAEDRQLNILTGGSAGVREQMRVGGST >Mature_125_residues GWASDTYADLTRQQYQDWKNRFYPQLKKMMDYAAGDRLLSDQLFRADRNTQSSLRSALSGQVNQMARYGTPVARDPQDNS LGLRTALAHAGAKNSIRDAAEDRQLNILTGGSAGVREQMRVGGST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14000; Mature: 13869
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWASDTYADLTRQQYQDWKNRFYPQLKKMMDYAAGDRLLSDQLFRADRNTQSSLRSALS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GQVNQMARYGTPVARDPQDNSLGLRTALAHAGAKNSIRDAAEDRQLNILTGGSAGVREQM HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHH RVGGST HCCCCC >Mature Secondary Structure GWASDTYADLTRQQYQDWKNRFYPQLKKMMDYAAGDRLLSDQLFRADRNTQSSLRSALS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GQVNQMARYGTPVARDPQDNSLGLRTALAHAGAKNSIRDAAEDRQLNILTGGSAGVREQM HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHH RVGGST HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA