Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919864

Identifier: 238919864

GI number: 238919864

Start: 1896692

End: 1896853

Strand: Direct

Name: 238919864

Synonym: NT01EI_1968

Alternate gene names: NA

Gene position: 1896692-1896853 (Clockwise)

Preceding gene: 238919863

Following gene: 238919865

Centisome position: 49.75

GC content: 53.09

Gene sequence:

>162_bases
ATGTGTAACGGTAATTGTGAACATCGTCACCAGATGCTGCTGCCGGTGGCATACCCAATTCTGGAGATTGAGAAACATAC
GGCGCTGGAGTGGAACTTTCGTGTTGCCTGCGACTTTCCGCTGCTCTTCAGGTGCGTCTGGGCAGGGCAGTCGTACCAGT
AA

Upstream 100 bases:

>100_bases
GCCGCTGCGATGAACGTTGCTCACGGTATATAAAATTTTCCAATATTACTAATAAGATGAACGCTGAAGTCGCCAGGGTG
CTGCAGGATGAGCAAGAATA

Downstream 100 bases:

>100_bases
GAAGACACTTACGTCGGCAATGTACATCTTAAATCGGTTTAGCGGTTTATCGGCATGGCTCAGGTTCGCTACGGCGGGCC
TTTTTTGCAAAAAAAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MCNGNCEHRHQMLLPVAYPILEIEKHTALEWNFRVACDFPLLFRCVWAGQSYQ

Sequences:

>Translated_53_residues
MCNGNCEHRHQMLLPVAYPILEIEKHTALEWNFRVACDFPLLFRCVWAGQSYQ
>Mature_53_residues
MCNGNCEHRHQMLLPVAYPILEIEKHTALEWNFRVACDFPLLFRCVWAGQSYQ

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6280; Mature: 6280

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNGNCEHRHQMLLPVAYPILEIEKHTALEWNFRVACDFPLLFRCVWAGQSYQ
CCCCCCCCCCEEECCCCCCEEEECCCCEEECCEEEEECCHHHHHEECCCCCCC
>Mature Secondary Structure
MCNGNCEHRHQMLLPVAYPILEIEKHTALEWNFRVACDFPLLFRCVWAGQSYQ
CCCCCCCCCCEEECCCCCCEEEECCCCEEECCEEEEECCHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA