Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919851

Identifier: 238919851

GI number: 238919851

Start: 1883915

End: 1884034

Strand: Direct

Name: 238919851

Synonym: NT01EI_1955

Alternate gene names: NA

Gene position: 1883915-1884034 (Clockwise)

Preceding gene: 238919849

Following gene: 238919852

Centisome position: 49.42

GC content: 21.67

Gene sequence:

>120_bases
ATGCAATTACTTATTTTAAAAAGCTTTTCCTATTGGAGAAATATCTTTTCCATATTGAATTGTTTAATAAAATTATTTAA
TTGCTTTTATTTCATATCATTATCTATGTTAACCTGCTGA

Upstream 100 bases:

>100_bases
TCACAAAACTTGCATCCCTATAAACAGAATAGAAAGAGTTGAGCGCAGGGGGTAATTATAATATTTCTCATTTGACAAAA
ACAAACAAAGAGCGGGGAGT

Downstream 100 bases:

>100_bases
TAACAAGAAGCGTGCCAGGTTAATCTGGCGCTAAAATGTGATATGGTTTTTGTATGTTCTCAGCCTCAGTCAGATGAGGC
GCCAACTTTATATTGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MQLLILKSFSYWRNIFSILNCLIKLFNCFYFISLSMLTC

Sequences:

>Translated_39_residues
MQLLILKSFSYWRNIFSILNCLIKLFNCFYFISLSMLTC
>Mature_39_residues
MQLLILKSFSYWRNIFSILNCLIKLFNCFYFISLSMLTC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4729; Mature: 4729

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
12.8 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLILKSFSYWRNIFSILNCLIKLFNCFYFISLSMLTC
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLLILKSFSYWRNIFSILNCLIKLFNCFYFISLSMLTC
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA