| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ppsA [H]
Identifier: 238919812
GI number: 238919812
Start: 1845160
End: 1847535
Strand: Direct
Name: ppsA [H]
Synonym: NT01EI_1916
Alternate gene names: 238919812
Gene position: 1845160-1847535 (Clockwise)
Preceding gene: 238919798
Following gene: 238919814
Centisome position: 48.4
GC content: 60.44
Gene sequence:
>2376_bases ATGTCTAGTAATGGCGCGCAATTACAGAATGTGGTGTGGTACAACCAGCTCGGGATGCACGATGTCGAGAGGGTAGGCGG TAAAAATGCCTCCCTGGGAGAGATGATAACCAACCTGTCTGAACTGGGTGTGTCGGTGCCGAATGGCTTTGCCACTACGG CGCAGGCGTTTAATGATTTTCTGGAACAGAGCGGCGTCAATCAGCGGATCTATACGCTGTTGGATCAGACGGACATCGAT GATATAGACGCGCTGGCGCGGGCGGGGGCGCAGATCCGCCGCCTGGTGATCGAAACCCCGTTTCCTGCGGCGCTGGAGGC GGAAATCCGCAGCGCCTATGCCACCTTGGCCGCGGACAACGTCAATGCCTCCTTCGCCGTGCGCTCCTCGGCGACGGCAG AGGATATGCCTGATGCCTCGTTTGCCGGGCAGCAGGAGACCTTTCTCAACGTACAGGGCATCGATGCGGTGATGACGGCG GTGAAGCATGTTTTCGCCTCGCTGTTTAACGATCGTGCCATTTCATACCGGGTGCACCAGGGCTATGACCACCGCGGCGT GGCACTCTCTGCCGGGGTTCAGCTGATGGTACGCTCCGATCTGGCAGCCTCTGGAGTGATGTTTACCCTGGATACCGAAT CGGGGTTTGATCAGGTGGTGTTTATCACCTCGGCCTATGGGCTGGGCGAAATGGTGGTGCAGGGAGCGGTAAACCCCGAT GAGTTCTACGTGCATAAACCGACCCTGCAGGCGGGGCGGCCGGCCATCGTGCGCCGTACGCTGGGGTCGAAGAAGATCCG TATGGTGTATGCCGACAGCCAGGAGCACGGTAGGCAGGTGCGGATTGAGGATGTCCCTGCGGTGCAGAGCGGGCGTTTTA GCCTGAGCGACGGGGAGATCCAGCAGCTGGCCCGGCAGGCGCTGCTGATCGAACAGCACTATGGCCGTCCGATGGACATT GAATGGGCCAAGGACGGGCACAGTGGGCGGCTGTACATCGTTCAGGCCCGTCCGGAGACCGTACGGGCCAACGAGCAGGT GATGGAGCGCTATCAGTTGAGCCAGCGCGGCGAGGTGCTGGTGGAGGGACGCGCCATCGGCCATCGTATCGGCGCCGGGC CGGTGAAGGTGATCACCAGTATCAGTGAGATGCACCTGATCCAGGCGGGCGATGTGCTGGTGACGGACATGACCGATCCG GACTGGGAGCCGATCATGAAGCGGGCCTCGGCGATTGTCACCAACCGCGGCGGGCGCACCTGTCATGCGGCGATCATCGC GCGCGAACTGGGGATCCCGGCGGTCGTCGGTTGCGGCGATGCCACCGAGCGCCTGCGACCGGGGGCGGCGGTCACAGTTT CCTGCGCCGAAGGGGATACCGGCTACGTTTACCACGGGCAGATCGACTTCAGCGTACAGAGTTCGCAGGTAGAGCAGATG CCGGCGCTTCCCCTGAAGATCATGATGAACGTCGGTAACCCGGACCGCGCCTTTGACTTCGCCCGTCTGCCCAACGACGG CGTGGGGCTGGCGCGTCTGGAGTTTATCATTAACCGGATGATCGGCGTACATCCGCGTGCGGCACTGGAGTTTGAGCGAC AGGATGCGACGGTGCAGGCGGAGATCCGTCAGATGATGCAGGGATTTGACGATCCGGTGGAGTTCTACATCAGCCGACTG ACTGAGGGTATTGCGACGCTGGCGGCGGCATTCTGGCCCAAACGGGTGATTGTCCGTCTGTCAGACTTCAAGTCCAATGA ATATGCCAACCTGATTGGCGGTGAGCACTATGAGCCCCATGAGGAAAACCCGATGTTGGGGTTCCGCGGCGCCGGGCGCT ATGTGGCGGAGAGCTTCGCCCCCTGTTTTGCGCTGGAGTGCGCTGCCATTAAACGGGTGCGCAATACGATGGGGCTGACC AACGTCGAGGTGATGATCCCCTTTGTGCGTACGGTGGAGCAGGCGCAGGCGGTGGTTTCTCAGTTGGCGAAAGAGGGGCT GCGCCGAGGTGAAAATGGCCTGAAGGTGATCATGATGTGCGAGATCCCCTCCAATGCGCTGTTGGCCGACGCATTTCTGG CCCATTTTGACGGTTTCTCCATCGGCTCTAACGATATGACTCAGCTCACCCTGGGCCTGGATCGCGACTCTGGAGTGGTC TCTGCGCTGTTTGACGAGCGCAATGCGGCGGTGAAAGCACTGCTGTCGATGGCTATCCGCAGCGCCAAGGCGCAGGGGAA ATATGTGGGGATCTGCGGTCAGGGTCCTTCGGATCATGAGGATTTTGCCCGCTGGCTCATGGAGCAGGGAATTGACAGTC TGTCACTGAATCCTGATACGGTGGCGCAGACCTGGATTAATCTGGCAGAAAAATAA
Upstream 100 bases:
>100_bases ATCTATCTTGGCCTGTGTCGACATTATGTTAGTCTGATTACGCCGCGTTGGCGGTATCTTGTCTCCGAAACCCATGCTTT GAAATAAAAGGATTGCTTCG
Downstream 100 bases:
>100_bases GCGTTATTTTGATAATAGTCTAAAACGGTCGCTGTAATGCGGCCGTTTTTTCTGCCATTTTTATTTTTTCTCGACGCGTC AAAAATAAACGGCCGGTTGC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MSSNGAQLQNVVWYNQLGMHDVERVGGKNASLGEMITNLSELGVSVPNGFATTAQAFNDFLEQSGVNQRIYTLLDQTDID DIDALARAGAQIRRLVIETPFPAALEAEIRSAYATLAADNVNASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAVMTA VKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQLMVRSDLAASGVMFTLDTESGFDQVVFITSAYGLGEMVVQGAVNPD EFYVHKPTLQAGRPAIVRRTLGSKKIRMVYADSQEHGRQVRIEDVPAVQSGRFSLSDGEIQQLARQALLIEQHYGRPMDI EWAKDGHSGRLYIVQARPETVRANEQVMERYQLSQRGEVLVEGRAIGHRIGAGPVKVITSISEMHLIQAGDVLVTDMTDP DWEPIMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERLRPGAAVTVSCAEGDTGYVYHGQIDFSVQSSQVEQM PALPLKIMMNVGNPDRAFDFARLPNDGVGLARLEFIINRMIGVHPRAALEFERQDATVQAEIRQMMQGFDDPVEFYISRL TEGIATLAAAFWPKRVIVRLSDFKSNEYANLIGGEHYEPHEENPMLGFRGAGRYVAESFAPCFALECAAIKRVRNTMGLT NVEVMIPFVRTVEQAQAVVSQLAKEGLRRGENGLKVIMMCEIPSNALLADAFLAHFDGFSIGSNDMTQLTLGLDRDSGVV SALFDERNAAVKALLSMAIRSAKAQGKYVGICGQGPSDHEDFARWLMEQGIDSLSLNPDTVAQTWINLAEK
Sequences:
>Translated_791_residues MSSNGAQLQNVVWYNQLGMHDVERVGGKNASLGEMITNLSELGVSVPNGFATTAQAFNDFLEQSGVNQRIYTLLDQTDID DIDALARAGAQIRRLVIETPFPAALEAEIRSAYATLAADNVNASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAVMTA VKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQLMVRSDLAASGVMFTLDTESGFDQVVFITSAYGLGEMVVQGAVNPD EFYVHKPTLQAGRPAIVRRTLGSKKIRMVYADSQEHGRQVRIEDVPAVQSGRFSLSDGEIQQLARQALLIEQHYGRPMDI EWAKDGHSGRLYIVQARPETVRANEQVMERYQLSQRGEVLVEGRAIGHRIGAGPVKVITSISEMHLIQAGDVLVTDMTDP DWEPIMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERLRPGAAVTVSCAEGDTGYVYHGQIDFSVQSSQVEQM PALPLKIMMNVGNPDRAFDFARLPNDGVGLARLEFIINRMIGVHPRAALEFERQDATVQAEIRQMMQGFDDPVEFYISRL TEGIATLAAAFWPKRVIVRLSDFKSNEYANLIGGEHYEPHEENPMLGFRGAGRYVAESFAPCFALECAAIKRVRNTMGLT NVEVMIPFVRTVEQAQAVVSQLAKEGLRRGENGLKVIMMCEIPSNALLADAFLAHFDGFSIGSNDMTQLTLGLDRDSGVV SALFDERNAAVKALLSMAIRSAKAQGKYVGICGQGPSDHEDFARWLMEQGIDSLSLNPDTVAQTWINLAEK >Mature_790_residues SSNGAQLQNVVWYNQLGMHDVERVGGKNASLGEMITNLSELGVSVPNGFATTAQAFNDFLEQSGVNQRIYTLLDQTDIDD IDALARAGAQIRRLVIETPFPAALEAEIRSAYATLAADNVNASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAVMTAV KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQLMVRSDLAASGVMFTLDTESGFDQVVFITSAYGLGEMVVQGAVNPDE FYVHKPTLQAGRPAIVRRTLGSKKIRMVYADSQEHGRQVRIEDVPAVQSGRFSLSDGEIQQLARQALLIEQHYGRPMDIE WAKDGHSGRLYIVQARPETVRANEQVMERYQLSQRGEVLVEGRAIGHRIGAGPVKVITSISEMHLIQAGDVLVTDMTDPD WEPIMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERLRPGAAVTVSCAEGDTGYVYHGQIDFSVQSSQVEQMP ALPLKIMMNVGNPDRAFDFARLPNDGVGLARLEFIINRMIGVHPRAALEFERQDATVQAEIRQMMQGFDDPVEFYISRLT EGIATLAAAFWPKRVIVRLSDFKSNEYANLIGGEHYEPHEENPMLGFRGAGRYVAESFAPCFALECAAIKRVRNTMGLTN VEVMIPFVRTVEQAQAVVSQLAKEGLRRGENGLKVIMMCEIPSNALLADAFLAHFDGFSIGSNDMTQLTLGLDRDSGVVS ALFDERNAAVKALLSMAIRSAKAQGKYVGICGQGPSDHEDFARWLMEQGIDSLSLNPDTVAQTWINLAEK
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=790, Percent_Identity=81.0126582278481, Blast_Score=1342, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=442, Percent_Identity=25.5656108597285, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1788726, Length=191, Percent_Identity=34.5549738219895, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI48994992, Length=372, Percent_Identity=26.3440860215054, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1789193, Length=406, Percent_Identity=24.384236453202, Blast_Score=76, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17564524, Length=345, Percent_Identity=26.9565217391304, Blast_Score=89, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 86420; Mature: 86289
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNGAQLQNVVWYNQLGMHDVERVGGKNASLGEMITNLSELGVSVPNGFATTAQAFNDF CCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LEQSGVNQRIYTLLDQTDIDDIDALARAGAQIRRLVIETPFPAALEAEIRSAYATLAADN HHHCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHEECC VNASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAVMTAVKHVFASLFNDRAISYRVHQ CCCEEEEECCCCCCCCCCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEC GYDHRGVALSAGVQLMVRSDLAASGVMFTLDTESGFDQVVFITSAYGLGEMVVQGAVNPD CCCCCCEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHCCCCCC EFYVHKPTLQAGRPAIVRRTLGSKKIRMVYADSQEHGRQVRIEDVPAVQSGRFSLSDGEI CEEEECCCCCCCCCHHHHHHCCCCEEEEEEECCHHCCCEEEEECCCCCCCCCEECCCHHH QQLARQALLIEQHYGRPMDIEWAKDGHSGRLYIVQARPETVRANEQVMERYQLSQRGEVL HHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCHHCCCHHHHHHHHHHCCCCEE VEGRAIGHRIGAGPVKVITSISEMHLIQAGDVLVTDMTDPDWEPIMKRASAIVTNRGGRT EECCHHCCCCCCCHHHHHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC CHAAIIARELGIPAVVGCGDATERLRPGAAVTVSCAEGDTGYVYHGQIDFSVQSSQVEQM HHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEECHHHHHHC PALPLKIMMNVGNPDRAFDFARLPNDGVGLARLEFIINRMIGVHPRAALEFERQDATVQA CCCCEEEEEECCCCHHCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHEEECCCCCHHHH EIRQMMQGFDDPVEFYISRLTEGIATLAAAFWPKRVIVRLSDFKSNEYANLIGGEHYEPH HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHCCCCCCCCC EENPMLGFRGAGRYVAESFAPCFALECAAIKRVRNTMGLTNVEVMIPFVRTVEQAQAVVS CCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH QLAKEGLRRGENGLKVIMMCEIPSNALLADAFLAHFDGFSIGSNDMTQLTLGLDRDSGVV HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHH SALFDERNAAVKALLSMAIRSAKAQGKYVGICGQGPSDHEDFARWLMEQGIDSLSLNPDT HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHH VAQTWINLAEK HHHHHHHHHCC >Mature Secondary Structure SSNGAQLQNVVWYNQLGMHDVERVGGKNASLGEMITNLSELGVSVPNGFATTAQAFNDF CCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LEQSGVNQRIYTLLDQTDIDDIDALARAGAQIRRLVIETPFPAALEAEIRSAYATLAADN HHHCCCCHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHEECC VNASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAVMTAVKHVFASLFNDRAISYRVHQ CCCEEEEECCCCCCCCCCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEC GYDHRGVALSAGVQLMVRSDLAASGVMFTLDTESGFDQVVFITSAYGLGEMVVQGAVNPD CCCCCCEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHCCCCCC EFYVHKPTLQAGRPAIVRRTLGSKKIRMVYADSQEHGRQVRIEDVPAVQSGRFSLSDGEI CEEEECCCCCCCCCHHHHHHCCCCEEEEEEECCHHCCCEEEEECCCCCCCCCEECCCHHH QQLARQALLIEQHYGRPMDIEWAKDGHSGRLYIVQARPETVRANEQVMERYQLSQRGEVL HHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCHHCCCHHHHHHHHHHCCCCEE VEGRAIGHRIGAGPVKVITSISEMHLIQAGDVLVTDMTDPDWEPIMKRASAIVTNRGGRT EECCHHCCCCCCCHHHHHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC CHAAIIARELGIPAVVGCGDATERLRPGAAVTVSCAEGDTGYVYHGQIDFSVQSSQVEQM HHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEECCCCCCEEEEEEEEEEECHHHHHHC PALPLKIMMNVGNPDRAFDFARLPNDGVGLARLEFIINRMIGVHPRAALEFERQDATVQA CCCCEEEEEECCCCHHCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHEEECCCCCHHHH EIRQMMQGFDDPVEFYISRLTEGIATLAAAFWPKRVIVRLSDFKSNEYANLIGGEHYEPH HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHCCCCCCCCC EENPMLGFRGAGRYVAESFAPCFALECAAIKRVRNTMGLTNVEVMIPFVRTVEQAQAVVS CCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH QLAKEGLRRGENGLKVIMMCEIPSNALLADAFLAHFDGFSIGSNDMTQLTLGLDRDSGVV HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHH SALFDERNAAVKALLSMAIRSAKAQGKYVGICGQGPSDHEDFARWLMEQGIDSLSLNPDT HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHH VAQTWINLAEK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]