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The map label for this gene is pspC [H]

Identifier: 238919730

GI number: 238919730

Start: 1772080

End: 1772433

Strand: Direct

Name: pspC [H]

Synonym: NT01EI_1834

Alternate gene names: 238919730

Gene position: 1772080-1772433 (Clockwise)

Preceding gene: 238919729

Following gene: 238919731

Centisome position: 46.48

GC content: 67.51

Gene sequence:

>354_bases
ATGAGCCCGTCGTTGTCTCCGCGTCGTCTGTACCGCCTGCCTCAGCGCGGGGTGTTCAAGGGGGTCTGCGCCGGGATCGC
CGACTACTTTGATGTTCCGGTTGCTCTGGTGCGGGCGATGGCGGTCGTGTCGATCTTCTGCGGCCTGTTTGTTATTACGC
TGGCGGCGTACCTGATCCTGGCCTTTACGCTGCCGGTGGCACAGGGCGAACGGCCGCCCGAGGCGCCGGGCGTGCGGGCG
CAGCTGGCGCGCACCGCCGGGGAGCTGGAGGCGTGCGAACAGCGGCTGCGTCGTCTGGAGCGCTATGTGACCTCGCCGGC
GTTTAGCCTGAACCGGCGCTTCCGTCAGCTATAG

Upstream 100 bases:

>100_bases
GTCTGACTCAGCTGAGCGAGGAGGCGCAGCGGATGCGCCAGCGTATTGGCGCCCTGGAGGCGATTCTGGATGCGGAGCAT
CCCAGCTGGAGGGACGCCTG

Downstream 100 bases:

>100_bases
CCGTATCAGCGCCGCCGGATACCCGAGGAGAGGCATATGACCTTCTTTCGTCAGGCGCGCCGCGCCGGACCGCTGTGCGC
CGCCCCGGCGGGCATCGCCG

Product: DNA-binding transcriptional activator PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSPSLSPRRLYRLPQRGVFKGVCAGIADYFDVPVALVRAMAVVSIFCGLFVITLAAYLILAFTLPVAQGERPPEAPGVRA
QLARTAGELEACEQRLRRLERYVTSPAFSLNRRFRQL

Sequences:

>Translated_117_residues
MSPSLSPRRLYRLPQRGVFKGVCAGIADYFDVPVALVRAMAVVSIFCGLFVITLAAYLILAFTLPVAQGERPPEAPGVRA
QLARTAGELEACEQRLRRLERYVTSPAFSLNRRFRQL
>Mature_116_residues
SPSLSPRRLYRLPQRGVFKGVCAGIADYFDVPVALVRAMAVVSIFCGLFVITLAAYLILAFTLPVAQGERPPEAPGVRAQ
LARTAGELEACEQRLRRLERYVTSPAFSLNRRFRQL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=115, Percent_Identity=52.1739130434783, Blast_Score=114, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 13011; Mature: 12879

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSLSPRRLYRLPQRGVFKGVCAGIADYFDVPVALVRAMAVVSIFCGLFVITLAAYLIL
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFTLPVAQGERPPEAPGVRAQLARTAGELEACEQRLRRLERYVTSPAFSLNRRFRQL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SPSLSPRRLYRLPQRGVFKGVCAGIADYFDVPVALVRAMAVVSIFCGLFVITLAAYLIL
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFTLPVAQGERPPEAPGVRAQLARTAGELEACEQRLRRLERYVTSPAFSLNRRFRQL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]