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The map label for this gene is ynaI [H]

Identifier: 238919721

GI number: 238919721

Start: 1763119

End: 1764090

Strand: Reverse

Name: ynaI [H]

Synonym: NT01EI_1824

Alternate gene names: 238919721

Gene position: 1764090-1763119 (Counterclockwise)

Preceding gene: 238919722

Following gene: 238919719

Centisome position: 46.27

GC content: 56.07

Gene sequence:

>972_bases
GTGGCTCTAATTGTCGAAAAACTGCATGCGCATCTGATACTGGCCGCCGTACTGCTGCTGCTCAGCGCGATGGTATATGG
CCTGCGCCAGTGCCGGGGAAACCGCGGCACCACCCTGCTTCAGGTGGCGCAGATCCTGCTTTGGCTGCTGCTGGTGCTGC
TGCTGTGTGAAGGAGTTAAAAAATACCTGGTCATCGTCGGACTCTGGCCGTGGATTAAATATATCTCTTTCTGCCAGACT
GTCCTGATCATCTTTGTCCTGTTTAAGGCCATCTCATCGGCCATCAATATCATCGCCGACCGGCAGGTTAAAAACGGGAT
CAACCGTTCGAAAACCCTGGTGGCGATCCGCGCTATTAATATCCTCATCCTGTTTCTGCTGGCGACCCTGTTCGGCGAGC
AGCTGGGGCTGAATATGTCCGGACTGCTGACCTTTGGCGGCGTCGGCGGCGTCGCCATCGGTATCGCCAGCCGCAATATC
CTCAGCAACCAGCTGTCCGGCGTGATGCTTTACTTCGATCGCCCCTTCAACGTCGGTGACTGGATCCGGCTACCGGAGAA
AAATACCGAGGGTGTGGTGACCGAAATCGGCCTGCGCACCACCAAAATTGTCACCTTCGACCAGAAGCCGCTGTATATTC
CCAACTCGGTATTTTCATCGATCATGATCGAGAACCCCGGGCGCAGCGACTACCGCAAGGTCGAGCTGGCGGCGATCGTC
AAAAGCTTTGATGCGCAGCAGGTCAGCACCCTGCTGGGGCTGATCGGCGACAAGGTGGCGCAGGATCCGCGGGTCAACAG
ACAGCTGGATACCTTTATCCATATGCACAATATTACCAAGGATGGTATCCAGATCCTGATTAGCCTGTTCGCCAATACCC
GAGATTACGATGTCTATCTGACGCTCAGGCAGAGCCTGATCGTCTACACTGTCGACACCGCCAGCGCGCAGGGGCTGGAG
GTCACCTGCTGA

Upstream 100 bases:

>100_bases
TTTTAACCCGCGCCGGGCGCCATCGCCCGCCGCCCCCCTTGACGAAAAAGACGGGTGCCCGTCCCCTGGACGTCCATGAA
TCTGTTTAAGGTAAACTGCT

Downstream 100 bases:

>100_bases
TAGCCCCCACGCTGCACCGTTCAAAAAAGGCCGCATCCGCGGCCTTGTTAGCATGTTACTGCGGCGTTTGCGCTAAGTTA
CAACGTAACTACGTCGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MALIVEKLHAHLILAAVLLLLSAMVYGLRQCRGNRGTTLLQVAQILLWLLLVLLLCEGVKKYLVIVGLWPWIKYISFCQT
VLIIFVLFKAISSAINIIADRQVKNGINRSKTLVAIRAINILILFLLATLFGEQLGLNMSGLLTFGGVGGVAIGIASRNI
LSNQLSGVMLYFDRPFNVGDWIRLPEKNTEGVVTEIGLRTTKIVTFDQKPLYIPNSVFSSIMIENPGRSDYRKVELAAIV
KSFDAQQVSTLLGLIGDKVAQDPRVNRQLDTFIHMHNITKDGIQILISLFANTRDYDVYLTLRQSLIVYTVDTASAQGLE
VTC

Sequences:

>Translated_323_residues
MALIVEKLHAHLILAAVLLLLSAMVYGLRQCRGNRGTTLLQVAQILLWLLLVLLLCEGVKKYLVIVGLWPWIKYISFCQT
VLIIFVLFKAISSAINIIADRQVKNGINRSKTLVAIRAINILILFLLATLFGEQLGLNMSGLLTFGGVGGVAIGIASRNI
LSNQLSGVMLYFDRPFNVGDWIRLPEKNTEGVVTEIGLRTTKIVTFDQKPLYIPNSVFSSIMIENPGRSDYRKVELAAIV
KSFDAQQVSTLLGLIGDKVAQDPRVNRQLDTFIHMHNITKDGIQILISLFANTRDYDVYLTLRQSLIVYTVDTASAQGLE
VTC
>Mature_322_residues
ALIVEKLHAHLILAAVLLLLSAMVYGLRQCRGNRGTTLLQVAQILLWLLLVLLLCEGVKKYLVIVGLWPWIKYISFCQTV
LIIFVLFKAISSAINIIADRQVKNGINRSKTLVAIRAINILILFLLATLFGEQLGLNMSGLLTFGGVGGVAIGIASRNIL
SNQLSGVMLYFDRPFNVGDWIRLPEKNTEGVVTEIGLRTTKIVTFDQKPLYIPNSVFSSIMIENPGRSDYRKVELAAIVK
SFDAQQVSTLLGLIGDKVAQDPRVNRQLDTFIHMHNITKDGIQILISLFANTRDYDVYLTLRQSLIVYTVDTASAQGLEV
TC

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=313, Percent_Identity=33.8658146964856, Blast_Score=197, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 35832; Mature: 35701

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIVEKLHAHLILAAVLLLLSAMVYGLRQCRGNRGTTLLQVAQILLWLLLVLLLCEGVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KYLVIVGLWPWIKYISFCQTVLIIFVLFKAISSAINIIADRQVKNGINRSKTLVAIRAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ILILFLLATLFGEQLGLNMSGLLTFGGVGGVAIGIASRNILSNQLSGVMLYFDRPFNVGD
HHHHHHHHHHHHHHHCCCHHHHEEECCCCHHEEHHHHHHHHHHHHCCEEEEECCCCCCCC
WIRLPEKNTEGVVTEIGLRTTKIVTFDQKPLYIPNSVFSSIMIENPGRSDYRKVELAAIV
CEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
KSFDAQQVSTLLGLIGDKVAQDPRVNRQLDTFIHMHNITKDGIQILISLFANTRDYDVYL
HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
TLRQSLIVYTVDTASAQGLEVTC
EEECCEEEEEEECCCCCCCEECC
>Mature Secondary Structure 
ALIVEKLHAHLILAAVLLLLSAMVYGLRQCRGNRGTTLLQVAQILLWLLLVLLLCEGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KYLVIVGLWPWIKYISFCQTVLIIFVLFKAISSAINIIADRQVKNGINRSKTLVAIRAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ILILFLLATLFGEQLGLNMSGLLTFGGVGGVAIGIASRNILSNQLSGVMLYFDRPFNVGD
HHHHHHHHHHHHHHHCCCHHHHEEECCCCHHEEHHHHHHHHHHHHCCEEEEECCCCCCCC
WIRLPEKNTEGVVTEIGLRTTKIVTFDQKPLYIPNSVFSSIMIENPGRSDYRKVELAAIV
CEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
KSFDAQQVSTLLGLIGDKVAQDPRVNRQLDTFIHMHNITKDGIQILISLFANTRDYDVYL
HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
TLRQSLIVYTVDTASAQGLEVTC
EEECCEEEEEEECCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]