| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919720
Identifier: 238919720
GI number: 238919720
Start: 1761848
End: 1763041
Strand: Direct
Name: 238919720
Synonym: NT01EI_1823
Alternate gene names: NA
Gene position: 1761848-1763041 (Clockwise)
Preceding gene: 238919716
Following gene: 238919728
Centisome position: 46.21
GC content: 60.8
Gene sequence:
>1194_bases ATGATTATCAAACCCAAGGTTCGCGGTTTTATCTGCACCACTACCCATCCGGTTGGCTGTGAGGCCAACGTCCGTCGTCA GATCGCCTATACCCAGGCTAAAGGACCGATTGAGAACGGCCCTAAAAAAGTGCTGGTGATCGGTGCGTCGACCGGCTATG GCCTGGCGTCGCGGATCGCCGCAGCCTTTGGCGCAGGCGCCGCCACCATCGGCGTGTTCTTTGAGAAGCCGGGCACGGAA ACCAAGACCGGGACCGCCGGCTGGTATAATGCCGCCGCGTTTGACAAGGCGGCCAAAGAGGCGGGGCTCTACGCCAAGAG CGTCAACGGCGATGCGTTCTCCAACGAATGCCGCCAGCAGGTGATCGAGCTGATCAAGCAGGATCTGGGGCAGGTGGATC TGGTGGTCTATTCGCTGGCCTCGCCGGTGCGCAAGCTGCCGGATACGGGCGAGGTGGTTCGCTCGGCGCTGAAGCCTATC GGGGAGGTGTATACCACCACCGCCATCGACACCAATAAGGATCAGATCATCTCCGCCAGCGTCGAGCCGGCGACGGAAGA AGAGATCCAGAACACCATCACCGTGATGGGCGGGCAGGACTGGGAGCTGTGGATGTCCGCGCTGCGTGATGCCGGGGTAC TGGCCGACGGTGCCAAGTCCGTGGCGTACTCCTACATCGGCACCGATCTGACCTGGCCTATCTACTGGCACGGCACGCTG GGCCGCGCGAAGGAAGATCTGGATCGCGCCGCTGCGGGTATCCGCGGCGATCTCGCCGCTCACGGCGGTACTGCCCATGT GGCGGTGCTGAAATCAGTGGTGACTCAGGCCTCCAGCGCGATCCCGGTGATGCCGCTGTACATCTCGATGTCTTTCAAGA TAATGAAGGAAAAGGGGATCCACGAAGGCTGTATGGAGCAGGTTGACCGTATGATGCGCACGCGCCTGTACGGCAGCGAC ATGGCGCTGGACGATCACGCCCGCATCCGTATGGATGACTGGGAGCTGCGCGATGACGTGCAGCAGACCTGTCGCGATCT GTGGCCATCCATCACCAGCGAGAACCTCAGCCAGCTGACTGACTACAGCGGCTACAAACAGGAGTTTCTGCGCCTGTTCG GCTTCGGTCTGGATGGGGTAGACTACGATGCTGATGTGAATCCGGACGTGCAGTTCGACGTAGTTACGTTGTAA
Upstream 100 bases:
>100_bases CGGGACTTTTTCGCCGTGGACAACACATCAGAGCACCCAATTGGGGTACAATGCGCTATCTTATGCCCTGATTTCATCCA TAAAACGGATAAGAGACACT
Downstream 100 bases:
>100_bases CTTAGCGCAAACGCCGCAGTAACATGCTAACAAGGCCGCGGATGCGGCCTTTTTTGAACGGTGCAGCGTGGGGGCTATCA GCAGGTGACCTCCAGCCCCT
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MIIKPKVRGFICTTTHPVGCEANVRRQIAYTQAKGPIENGPKKVLVIGASTGYGLASRIAAAFGAGAATIGVFFEKPGTE TKTGTAGWYNAAAFDKAAKEAGLYAKSVNGDAFSNECRQQVIELIKQDLGQVDLVVYSLASPVRKLPDTGEVVRSALKPI GEVYTTTAIDTNKDQIISASVEPATEEEIQNTITVMGGQDWELWMSALRDAGVLADGAKSVAYSYIGTDLTWPIYWHGTL GRAKEDLDRAAAGIRGDLAAHGGTAHVAVLKSVVTQASSAIPVMPLYISMSFKIMKEKGIHEGCMEQVDRMMRTRLYGSD MALDDHARIRMDDWELRDDVQQTCRDLWPSITSENLSQLTDYSGYKQEFLRLFGFGLDGVDYDADVNPDVQFDVVTL
Sequences:
>Translated_397_residues MIIKPKVRGFICTTTHPVGCEANVRRQIAYTQAKGPIENGPKKVLVIGASTGYGLASRIAAAFGAGAATIGVFFEKPGTE TKTGTAGWYNAAAFDKAAKEAGLYAKSVNGDAFSNECRQQVIELIKQDLGQVDLVVYSLASPVRKLPDTGEVVRSALKPI GEVYTTTAIDTNKDQIISASVEPATEEEIQNTITVMGGQDWELWMSALRDAGVLADGAKSVAYSYIGTDLTWPIYWHGTL GRAKEDLDRAAAGIRGDLAAHGGTAHVAVLKSVVTQASSAIPVMPLYISMSFKIMKEKGIHEGCMEQVDRMMRTRLYGSD MALDDHARIRMDDWELRDDVQQTCRDLWPSITSENLSQLTDYSGYKQEFLRLFGFGLDGVDYDADVNPDVQFDVVTL >Mature_397_residues MIIKPKVRGFICTTTHPVGCEANVRRQIAYTQAKGPIENGPKKVLVIGASTGYGLASRIAAAFGAGAATIGVFFEKPGTE TKTGTAGWYNAAAFDKAAKEAGLYAKSVNGDAFSNECRQQVIELIKQDLGQVDLVVYSLASPVRKLPDTGEVVRSALKPI GEVYTTTAIDTNKDQIISASVEPATEEEIQNTITVMGGQDWELWMSALRDAGVLADGAKSVAYSYIGTDLTWPIYWHGTL GRAKEDLDRAAAGIRGDLAAHGGTAHVAVLKSVVTQASSAIPVMPLYISMSFKIMKEKGIHEGCMEQVDRMMRTRLYGSD MALDDHARIRMDDWELRDDVQQTCRDLWPSITSENLSQLTDYSGYKQEFLRLFGFGLDGVDYDADVNPDVQFDVVTL
Specific function: Probable reductase
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1823_EDWI9 (C5BFN7)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933235.1 - GeneID: 7962144 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1823 - OMA: WELWINA - ProtClustDB: PRK13656 - GO: GO:0005488 - HAMAP: MF_01838 - InterPro: IPR016040 - InterPro: IPR010758 - Gene3D: G3DSA:3.40.50.720
Pfam domain/function: PF07055 scADH
EC number: NA
Molecular weight: Translated: 43194; Mature: 43194
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKPKVRGFICTTTHPVGCEANVRRQIAYTQAKGPIENGPKKVLVIGASTGYGLASRIA CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH AAFGAGAATIGVFFEKPGTETKTGTAGWYNAAAFDKAAKEAGLYAKSVNGDAFSNECRQQ HHHCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHH VIELIKQDLGQVDLVVYSLASPVRKLPDTGEVVRSALKPIGEVYTTTAIDTNKDQIISAS HHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCEEECC VEPATEEEIQNTITVMGGQDWELWMSALRDAGVLADGAKSVAYSYIGTDLTWPIYWHGTL CCCCCHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCC GRAKEDLDRAAAGIRGDLAAHGGTAHVAVLKSVVTQASSAIPVMPLYISMSFKIMKEKGI HHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCC HEGCMEQVDRMMRTRLYGSDMALDDHARIRMDDWELRDDVQQTCRDLWPSITSENLSQLT HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH DYSGYKQEFLRLFGFGLDGVDYDADVNPDVQFDVVTL CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MIIKPKVRGFICTTTHPVGCEANVRRQIAYTQAKGPIENGPKKVLVIGASTGYGLASRIA CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH AAFGAGAATIGVFFEKPGTETKTGTAGWYNAAAFDKAAKEAGLYAKSVNGDAFSNECRQQ HHHCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHH VIELIKQDLGQVDLVVYSLASPVRKLPDTGEVVRSALKPIGEVYTTTAIDTNKDQIISAS HHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCEEECC VEPATEEEIQNTITVMGGQDWELWMSALRDAGVLADGAKSVAYSYIGTDLTWPIYWHGTL CCCCCHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCC GRAKEDLDRAAAGIRGDLAAHGGTAHVAVLKSVVTQASSAIPVMPLYISMSFKIMKEKGI HHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCC HEGCMEQVDRMMRTRLYGSDMALDDHARIRMDDWELRDDVQQTCRDLWPSITSENLSQLT HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH DYSGYKQEFLRLFGFGLDGVDYDADVNPDVQFDVVTL CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA