| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is spy [H]
Identifier: 238919703
GI number: 238919703
Start: 1744956
End: 1745351
Strand: Direct
Name: spy [H]
Synonym: NT01EI_1806
Alternate gene names: 238919703
Gene position: 1744956-1745351 (Clockwise)
Preceding gene: 238919700
Following gene: 238919704
Centisome position: 45.77
GC content: 56.31
Gene sequence:
>396_bases ATGATGCACCATCAAAATCAGATGATGCAGAAAAAAGGCGCCCGGCACGACGGCGGCATGCTGGCCGGGATCCAGCTGAC GCCGGAGCAGCGCCAGCAGATCCGCGACATTCGTCTGCAGTTCCGCAGCGCGCACCCGATGCACCATAACGTGGACCACT TTAAGCAGCTGCACCAGCTGGTTGCCAGCGATAAGTTTGATGAGGCGGCCGCGCGCGCGCAGATTGAGGCCAACAACAAA ACGCGTAATGATGCGGCGCTGGCAAGGATGAAGATGGAAAACCAGATCTACAATCTGCTGACCCCGGAGCAGAAGACGCA GGTTAACCAGAATTTTGAAAAGCGCGTGCAGCTGATGCTGGATCGTCAGGGGAAAATGAATCAGTCCCAGCAGTAA
Upstream 100 bases:
>100_bases TCTTGCTTCGACCCTGGCGTTGGGCGTTGGCGCGGCGAATGCGGCCGATAGTACCGCCGCGCAGGCGCAGAATGGCACGG GTAATGGTAATGGCATGGGG
Downstream 100 bases:
>100_bases CCTTGACGCTGCGCTGAATAACGCCCCATTGGGGCGTTTTTTTATGGCGGAAGTAGCGGATAACCACGTCAGATTGCCCG CTACGCAAGACCACTGAGAT
Product: spheroplast protein Y
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMHHQNQMMQKKGARHDGGMLAGIQLTPEQRQQIRDIRLQFRSAHPMHHNVDHFKQLHQLVASDKFDEAAARAQIEANNK TRNDAALARMKMENQIYNLLTPEQKTQVNQNFEKRVQLMLDRQGKMNQSQQ
Sequences:
>Translated_131_residues MMHHQNQMMQKKGARHDGGMLAGIQLTPEQRQQIRDIRLQFRSAHPMHHNVDHFKQLHQLVASDKFDEAAARAQIEANNK TRNDAALARMKMENQIYNLLTPEQKTQVNQNFEKRVQLMLDRQGKMNQSQQ >Mature_131_residues MMHHQNQMMQKKGARHDGGMLAGIQLTPEQRQQIRDIRLQFRSAHPMHHNVDHFKQLHQLVASDKFDEAAARAQIEANNK TRNDAALARMKMENQIYNLLTPEQKTQVNQNFEKRVQLMLDRQGKMNQSQQ
Specific function: Could be involved in zinc resistance or another aspect of zinc metabolism [H]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli CpxP [H]
Homologues:
Organism=Escherichia coli, GI1788039, Length=130, Percent_Identity=39.2307692307692, Blast_Score=77, Evalue=5e-16, Organism=Escherichia coli, GI48994991, Length=104, Percent_Identity=40.3846153846154, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012899 [H]
Pfam domain/function: PF07813 LTXXQ [H]
EC number: NA
Molecular weight: Translated: 15368; Mature: 15368
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHHQNQMMQKKGARHDGGMLAGIQLTPEQRQQIRDIRLQFRSAHPMHHNVDHFKQLHQL CCCCHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VASDKFDEAAARAQIEANNKTRNDAALARMKMENQIYNLLTPEQKTQVNQNFEKRVQLML HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DRQGKMNQSQQ HCCCCCCCCCC >Mature Secondary Structure MMHHQNQMMQKKGARHDGGMLAGIQLTPEQRQQIRDIRLQFRSAHPMHHNVDHFKQLHQL CCCCHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VASDKFDEAAARAQIEANNKTRNDAALARMKMENQIYNLLTPEQKTQVNQNFEKRVQLML HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DRQGKMNQSQQ HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9068658; 9097039; 9278503; 9694902 [H]