| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919678
Identifier: 238919678
GI number: 238919678
Start: 1723398
End: 1723952
Strand: Direct
Name: 238919678
Synonym: NT01EI_1779
Alternate gene names: NA
Gene position: 1723398-1723952 (Clockwise)
Preceding gene: 238919677
Following gene: 238919681
Centisome position: 45.21
GC content: 59.28
Gene sequence:
>555_bases ATGTTCAGAACGCTTTTGGTGGCATCGCTGCTGACCCTGGGGGGGTGTGCCGATGCATCCATTGTTATCAATAATATCGA CAATAGTTCTGGGTACCGCGGCGGACAGGGCAGCGGGCAGATCTATATTTGCATGCTCACGCCATTCAGCAGCCTCTATG CCGACGCCGCGCGCAGCGAGCAGATTGCCCGCTATAAGGTGGGGCAGCGCTGTGAGCGGGGGCAGGGAGAGGGTAGCCTT TTCTGTCGGCCTAAGGATGCCAGCTGCAGCACCACGACGCTGGATGAGGGCTACAGCCAGGGCGCCGATCGCCTGATGGT GTATGAGGATTCGAGTCAGCGCGGGGCTTCGCTGAGCATTGATCGCGATATTCCCGATCTTTCCCGCTACCGTTTTGCCG ATCGTATCTCCTCGTTCTCGGTGCCGCAGGGGTGGACGGTGCGTTTCTACGAAGGGACTGACTACAGCGGGGGATACTAT ACCCGCAGCGGCGGAGAGCAGGAGGCGACCGGGTTTAACGACCACATCCGCTCTATCCGGATCCTGAACCGTTAA
Upstream 100 bases:
>100_bases CTTAATTCCCTGCGCCGGGCTATTAGGTACTATGAACTTCCGCCGCTGCTCTACGTGCGACGGGCTGCCGTAACAGTATA CTTATCAGATAGGAGTACTT
Downstream 100 bases:
>100_bases CCCCGGATGCACAGGGCGGCATCGTGCCCGCCGTCCTGCCGGGCTTCAGCGCTGCCCGGCCAGTGTGGTGCCGCTGCCGT GAGAGATGGGCTGGCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSEQIARYKVGQRCERGQGEGSL FCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSIDRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYY TRSGGEQEATGFNDHIRSIRILNR
Sequences:
>Translated_184_residues MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSEQIARYKVGQRCERGQGEGSL FCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSIDRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYY TRSGGEQEATGFNDHIRSIRILNR >Mature_184_residues MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSEQIARYKVGQRCERGQGEGSL FCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSIDRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYY TRSGGEQEATGFNDHIRSIRILNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20274; Mature: 20274
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50915 CRYSTALLIN_BETA_GAMMA L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSE CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH QIARYKVGQRCERGQGEGSLFCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSI HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE DRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYYTRSGGEQEATGFNDHIRSIR CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHEEE ILNR EECC >Mature Secondary Structure MFRTLLVASLLTLGGCADASIVINNIDNSSGYRGGQGSGQIYICMLTPFSSLYADAARSE CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH QIARYKVGQRCERGQGEGSLFCRPKDASCSTTTLDEGYSQGADRLMVYEDSSQRGASLSI HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE DRDIPDLSRYRFADRISSFSVPQGWTVRFYEGTDYSGGYYTRSGGEQEATGFNDHIRSIR CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHEEE ILNR EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA