| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919674
Identifier: 238919674
GI number: 238919674
Start: 1719895
End: 1720254
Strand: Direct
Name: 238919674
Synonym: NT01EI_1775
Alternate gene names: NA
Gene position: 1719895-1720254 (Clockwise)
Preceding gene: 238919670
Following gene: 238919676
Centisome position: 45.11
GC content: 58.89
Gene sequence:
>360_bases ATGAAGACGATAACGTTAGCGAGCGCGTTATTCCTGACCGTTGCCGCGGCGAACGCGCTGGCGGCTGACCTGCCCGTAGA GCAGGCGGCGGCCATGCACCGTGAGCTGCACGGTGCCATGGGCACCATGCATGAAGATATGATGAAGGGCATGATGAGCA ACGATCCCGATGTGGCCTTTGCCGCCGGGATGCTGCCGCACCATATCGGCGCCGTTGAGATGGCGAGAGTCGAGCTGAAG TACGGTAAAGATCCGCAGATGCGTCAGCTGGCGAAAAACATCATTGCCTCTCAGGATAAGGAGATCAAGGAGATGAAGGC GTGGCTGGCTGAACATCCTGATGCCGGTGCGGCGAAGTAG
Upstream 100 bases:
>100_bases TCTCATCGGTAGCCTGCGCGTGCGGAGAAAGTCCGCTTGACTCTCCCCTTAGGGGAGGGATTAGGATTTTCAAGATTATC CTACAGAACAGGAGGGTTGT
Downstream 100 bases:
>100_bases TTTCCCCTTATCCCCCGGTAGATCGGACCGTACCGCGTGTTGGCCTACGGTACCGTTGCGCGGTCGGTATGGAGGTGCTG GTAGTTATGGTAACCCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAFAAGMLPHHIGAVEMARVELK YGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK
Sequences:
>Translated_119_residues MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAFAAGMLPHHIGAVEMARVELK YGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK >Mature_119_residues MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAFAAGMLPHHIGAVEMARVELK YGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12824; Mature: 12824
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 10.1 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 10.1 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAF CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AAGMLPHHIGAVEMARVELKYGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAF CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AAGMLPHHIGAVEMARVELKYGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA