Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919674

Identifier: 238919674

GI number: 238919674

Start: 1719895

End: 1720254

Strand: Direct

Name: 238919674

Synonym: NT01EI_1775

Alternate gene names: NA

Gene position: 1719895-1720254 (Clockwise)

Preceding gene: 238919670

Following gene: 238919676

Centisome position: 45.11

GC content: 58.89

Gene sequence:

>360_bases
ATGAAGACGATAACGTTAGCGAGCGCGTTATTCCTGACCGTTGCCGCGGCGAACGCGCTGGCGGCTGACCTGCCCGTAGA
GCAGGCGGCGGCCATGCACCGTGAGCTGCACGGTGCCATGGGCACCATGCATGAAGATATGATGAAGGGCATGATGAGCA
ACGATCCCGATGTGGCCTTTGCCGCCGGGATGCTGCCGCACCATATCGGCGCCGTTGAGATGGCGAGAGTCGAGCTGAAG
TACGGTAAAGATCCGCAGATGCGTCAGCTGGCGAAAAACATCATTGCCTCTCAGGATAAGGAGATCAAGGAGATGAAGGC
GTGGCTGGCTGAACATCCTGATGCCGGTGCGGCGAAGTAG

Upstream 100 bases:

>100_bases
TCTCATCGGTAGCCTGCGCGTGCGGAGAAAGTCCGCTTGACTCTCCCCTTAGGGGAGGGATTAGGATTTTCAAGATTATC
CTACAGAACAGGAGGGTTGT

Downstream 100 bases:

>100_bases
TTTCCCCTTATCCCCCGGTAGATCGGACCGTACCGCGTGTTGGCCTACGGTACCGTTGCGCGGTCGGTATGGAGGTGCTG
GTAGTTATGGTAACCCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAFAAGMLPHHIGAVEMARVELK
YGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK

Sequences:

>Translated_119_residues
MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAFAAGMLPHHIGAVEMARVELK
YGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK
>Mature_119_residues
MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAFAAGMLPHHIGAVEMARVELK
YGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK

Specific function: Unknown

COG id: COG3544

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12824; Mature: 12824

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.1 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.1 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAF
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AAGMLPHHIGAVEMARVELKYGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKTITLASALFLTVAAANALAADLPVEQAAAMHRELHGAMGTMHEDMMKGMMSNDPDVAF
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AAGMLPHHIGAVEMARVELKYGKDPQMRQLAKNIIASQDKEIKEMKAWLAEHPDAGAAK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA