Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919671

Identifier: 238919671

GI number: 238919671

Start: 1719106

End: 1719276

Strand: Reverse

Name: 238919671

Synonym: NT01EI_1771

Alternate gene names: NA

Gene position: 1719276-1719106 (Counterclockwise)

Preceding gene: 238919672

Following gene: 238919669

Centisome position: 45.1

GC content: 63.74

Gene sequence:

>171_bases
ATGTCAACCCTTCAGCATGACCCCGCCCCGATCCCCCTGACGCCGCGGTTGACGCACGGTATCCTTTCCCAGCTCATCCG
CCTGCCGCTGGGCATTGAGGATGTCGCCGAGCTGCGGGCATATCTAGCTCTGGTACCCGACAGATCGCTGCCCAAGCCTC
AGGCGGAGTAG

Upstream 100 bases:

>100_bases
CCTGCGTTTTACGCGGCGAAACAGAGCTGGCCACCCAGCGCATCGGACAACGGTACCTGTTTACCCTGACCGAAAGTCTG
GGCGGCGTGGAGCGCCTGAT

Downstream 100 bases:

>100_bases
AGCGATGTCAGCGCGCCGTGCAGCTTCTCCAACAGCTCAGAGGTGACATACTTATCGGTTACGACTTCAATGTAGGCGCC
GCAGTCACCGGCTTCAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MSTLQHDPAPIPLTPRLTHGILSQLIRLPLGIEDVAELRAYLALVPDRSLPKPQAE

Sequences:

>Translated_56_residues
MSTLQHDPAPIPLTPRLTHGILSQLIRLPLGIEDVAELRAYLALVPDRSLPKPQAE
>Mature_55_residues
STLQHDPAPIPLTPRLTHGILSQLIRLPLGIEDVAELRAYLALVPDRSLPKPQAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6163; Mature: 6032

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLQHDPAPIPLTPRLTHGILSQLIRLPLGIEDVAELRAYLALVPDRSLPKPQAE
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
STLQHDPAPIPLTPRLTHGILSQLIRLPLGIEDVAELRAYLALVPDRSLPKPQAE
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA