Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919660

Identifier: 238919660

GI number: 238919660

Start: 1709239

End: 1709922

Strand: Reverse

Name: 238919660

Synonym: NT01EI_1761

Alternate gene names: NA

Gene position: 1709922-1709239 (Counterclockwise)

Preceding gene: 238919661

Following gene: 238919659

Centisome position: 44.85

GC content: 52.05

Gene sequence:

>684_bases
ATGAAACGTTCTTTTATTAACCAGAAAATTGATGAGGCGCACGCGTTCGCCAGACGCTTTCACCTCGCCCTGCCGGAATT
CGCCCACTTTACGTTGGATGATTGGAAGCAAAAAGATTTTGCCCACTGGCAGGAAGTTATCGACCTGCAACTGGGCTGGG
ACCTGACCGACTTCGGCGGCGGCAACTTTGCCGCGATGGGATTGGGCCTGTTCACCTTACGTAACGGTTCACTGACCGAC
AGGCGCTACCCTAAAAGTTACGCGGAGAAAATGTTGCTCGTCGACGTACAGCAAGAGACACCGTTCCATTTTCATTTCTC
CAAGAGGGAAGACATCCTCAACCGCGGCGGCGGAAATTTATGCATGCAGATTTACCATGCGACTCACGATGAACAACTCG
ATACCCAACGACCGGTCGAGATTGCCGTTGACGGCTGCCTCCATATCTTAGCGCCGGGAGAAAAACTGCTCCTGAAGCCG
GGCCAGGGCGTCTGCATCCCGCCTTACACCTATCACCGCTTTTGGGCGGAAAAAGCGTCGGTTCTGGGCTGGGAAGTCTC
TATGGTCAACGACGATCACACCGACAACCGTTTCCTGGTTCCGCTTTCCCGCTTTGCCGAAATTGAAGAAGATGAACCGG
TGAAATGGGTTCTTTGCAATGAATATCAATTGATTAAGGGATAA

Upstream 100 bases:

>100_bases
TCACGCCATCACGCACCGACAGCTGTGAATCTCTCGGCCCATGAAACGCTGACGCTGAGTTACCAAATTCGCTGTACCGC
AATTGATTGAGGAACCTGCC

Downstream 100 bases:

>100_bases
GTAATGAGTTTGATAAATCTGGCCAAGATGCTGAAAACCGCTAAAAAAGAACATTTTGCTGTTGGTGCGTTCAATGCCAT
CGATAATCACTTCGTCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKRSFINQKIDEAHAFARRFHLALPEFAHFTLDDWKQKDFAHWQEVIDLQLGWDLTDFGGGNFAAMGLGLFTLRNGSLTD
RRYPKSYAEKMLLVDVQQETPFHFHFSKREDILNRGGGNLCMQIYHATHDEQLDTQRPVEIAVDGCLHILAPGEKLLLKP
GQGVCIPPYTYHRFWAEKASVLGWEVSMVNDDHTDNRFLVPLSRFAEIEEDEPVKWVLCNEYQLIKG

Sequences:

>Translated_227_residues
MKRSFINQKIDEAHAFARRFHLALPEFAHFTLDDWKQKDFAHWQEVIDLQLGWDLTDFGGGNFAAMGLGLFTLRNGSLTD
RRYPKSYAEKMLLVDVQQETPFHFHFSKREDILNRGGGNLCMQIYHATHDEQLDTQRPVEIAVDGCLHILAPGEKLLLKP
GQGVCIPPYTYHRFWAEKASVLGWEVSMVNDDHTDNRFLVPLSRFAEIEEDEPVKWVLCNEYQLIKG
>Mature_227_residues
MKRSFINQKIDEAHAFARRFHLALPEFAHFTLDDWKQKDFAHWQEVIDLQLGWDLTDFGGGNFAAMGLGLFTLRNGSLTD
RRYPKSYAEKMLLVDVQQETPFHFHFSKREDILNRGGGNLCMQIYHATHDEQLDTQRPVEIAVDGCLHILAPGEKLLLKP
GQGVCIPPYTYHRFWAEKASVLGWEVSMVNDDHTDNRFLVPLSRFAEIEEDEPVKWVLCNEYQLIKG

Specific function: Unknown

COG id: COG3822

COG function: function code R; ABC-type sugar transport system, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26276; Mature: 26276

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSFINQKIDEAHAFARRFHLALPEFAHFTLDDWKQKDFAHWQEVIDLQLGWDLTDFGG
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCC
GNFAAMGLGLFTLRNGSLTDRRYPKSYAEKMLLVDVQQETPFHFHFSKREDILNRGGGNL
CCEEHHEEEEEEEECCCCCCCCCCHHHHCEEEEEEECCCCCEEEEECCHHHHHHCCCCCE
CMQIYHATHDEQLDTQRPVEIAVDGCLHILAPGEKLLLKPGQGVCIPPYTYHRFWAEKAS
EEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCEEEEECCCCEEECCHHHHHHHHHHHH
VLGWEVSMVNDDHTDNRFLVPLSRFAEIEEDEPVKWVLCNEYQLIKG
HEEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCEEEEEECCEEECCC
>Mature Secondary Structure
MKRSFINQKIDEAHAFARRFHLALPEFAHFTLDDWKQKDFAHWQEVIDLQLGWDLTDFGG
CCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCC
GNFAAMGLGLFTLRNGSLTDRRYPKSYAEKMLLVDVQQETPFHFHFSKREDILNRGGGNL
CCEEHHEEEEEEEECCCCCCCCCCHHHHCEEEEEEECCCCCEEEEECCHHHHHHCCCCCE
CMQIYHATHDEQLDTQRPVEIAVDGCLHILAPGEKLLLKPGQGVCIPPYTYHRFWAEKAS
EEEEEECCCCCCCCCCCCCEEEECCEEEEECCCCEEEEECCCCEEECCHHHHHHHHHHHH
VLGWEVSMVNDDHTDNRFLVPLSRFAEIEEDEPVKWVLCNEYQLIKG
HEEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA