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The map label for this gene is xp55 [H]

Identifier: 238919644

GI number: 238919644

Start: 1697171

End: 1698757

Strand: Reverse

Name: xp55 [H]

Synonym: NT01EI_1745

Alternate gene names: 238919644

Gene position: 1698757-1697171 (Counterclockwise)

Preceding gene: 238919648

Following gene: 238919643

Centisome position: 44.56

GC content: 59.11

Gene sequence:

>1587_bases
ATGAATATCGGCCAAATTACACTACTTTCCTGCGCCCTGACGCTCTCCATGCAAGCCCCGTTGATGGCCGCCGGACCGTC
AACGGCATCCCATACCCTGAAAATGGCCATTGGCGCCGAGCCTACGGAAGGTTTTGATCCGATGCTGGGCTGGAGCCACG
GCAGCTATTTCCTGCTGCACGCCCCCCTGCTGCGCCAAAAACCCGATATGAGCTGGGACAATCTGCTGACAGAAAAGATC
AGCACCAGCGACGATGGCAAGACGTGGATACTGACGCTGAAGCCAGATCTGAAGTTCTCCGATGGCTCGGCCCTGACCGC
CGAGGATGTGGTATTTACCTACAATAAGGCAGCACAGAGCGGTGGCAAGATCGATATGGGCAACTTCAGCCAGGCGCACG
CCCTGGATGATCGCCGCATTGAAATCACACTGAGCGCGCCGCAGAGCACCTTTGTCAACGTGCTGGGCTCACTGGGCATC
GTTCCCAGCGACAACTACAACGCCAAAACCTTCGCCAAGCAACCCATCGGCGCCGGCCCCTATCGCTTGGTCAGCTTTCA
GCCCGGTCAACAGCTGATCGTTGAGGCCAACCCCTACTACACGGGGAAGAAAAACGACTTCAATCGCCTGGTCTTCGTCT
TCCTGGATGAAGACAACGCCTACGCCGCTGCCCAGAGCGGACAACTCGATCTGGTACGTATTGCTCCCTCTATGGCCGTA
ACGCCCCAGCAGAAAAACCTGAAACTGTGGGTGCGTGACAGCGTAGAAAACCGCGGTATCGTCTTCCCCATGGTGCCCGC
CGGTAAAAAAGATGCCGAAGGCAATCCGATCGGCAATGATATCACCGCCGACGTCGCTATCCGTCGTGCCATCAACTACG
CCATCAACCGCCAGCAGCTGGCTGATACGCTGATGGAGGGTCATGCCATTCCTGCCTACAGCGCCGTACAGGGACTGCCG
TGGCAAAATCCGGATATTGCCTTTAAGGATGGCGATATCGCCAAAGCCAAGGCTATCCTGGACCAGGCGGGGTGGGTGCC
GGGCAAAGACGGCATACGTGAAAAGAGTGGCCAGGCCGCCCGTCTGACCCTGTGGTACGCCAGCGGTGACAGCACCCGTC
GCGACATCGCCGAGGCCGTGCGCGCCACGCTGCAGCCGCTGGGGATCGCCATCACCCTGAAATCCGGCAGCTGGGAAACT
GTTGAGCGCAATATGCACGCCAACCCGACCCTGTTCGGCTGGGGTAGCCTGGATCCCATGGAGCTGTATCACCACTACAG
CGGAAAAGCCGCCGGCGTGGAGTACTATAACCCTGGCTATTACAGCAATCCGGCGGTCGAACGCCATCTGCAGCAGGCAG
TGGACGCCCCTGACTGGCGCAAGGCGCTGCCGTTCTGGCAGCAGGTCGAATGGGATGGGCAGCAGGGCGCCGGTGTCCAG
GGCGATGCTGCCTGGGCCTGGCTGCTGAATATACAGCACACCTATCTGGCCAACCCCTGCATCAATCTGGGTAAAGGTGC
TCCTGAGATTCACGGCAGCTGGTCGCTGTTGAACAATCTGGATGACTGGACCTGGACCTGCCGTTAA

Upstream 100 bases:

>100_bases
CTCTTCCCGCTGCGCGGTATACCCGATTCACCGTGTGCACATGTAGCGACAGTGACGTCGCGATGACGAAGTAAACAACA
AAAAATCTGGGAATATAATG

Downstream 100 bases:

>100_bases
TGATGCGTCTGCTTGCCCCACTGCTGCGGCTGGCTTTACTTCTGGTGCTGGTGGCTGCTGGCACCTTTTTACTGCTCAGC
TTTTCACCGGTCGATCCCAT

Product: extracellular solute-binding protein family 5

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MNIGQITLLSCALTLSMQAPLMAAGPSTASHTLKMAIGAEPTEGFDPMLGWSHGSYFLLHAPLLRQKPDMSWDNLLTEKI
STSDDGKTWILTLKPDLKFSDGSALTAEDVVFTYNKAAQSGGKIDMGNFSQAHALDDRRIEITLSAPQSTFVNVLGSLGI
VPSDNYNAKTFAKQPIGAGPYRLVSFQPGQQLIVEANPYYTGKKNDFNRLVFVFLDEDNAYAAAQSGQLDLVRIAPSMAV
TPQQKNLKLWVRDSVENRGIVFPMVPAGKKDAEGNPIGNDITADVAIRRAINYAINRQQLADTLMEGHAIPAYSAVQGLP
WQNPDIAFKDGDIAKAKAILDQAGWVPGKDGIREKSGQAARLTLWYASGDSTRRDIAEAVRATLQPLGIAITLKSGSWET
VERNMHANPTLFGWGSLDPMELYHHYSGKAAGVEYYNPGYYSNPAVERHLQQAVDAPDWRKALPFWQQVEWDGQQGAGVQ
GDAAWAWLLNIQHTYLANPCINLGKGAPEIHGSWSLLNNLDDWTWTCR

Sequences:

>Translated_528_residues
MNIGQITLLSCALTLSMQAPLMAAGPSTASHTLKMAIGAEPTEGFDPMLGWSHGSYFLLHAPLLRQKPDMSWDNLLTEKI
STSDDGKTWILTLKPDLKFSDGSALTAEDVVFTYNKAAQSGGKIDMGNFSQAHALDDRRIEITLSAPQSTFVNVLGSLGI
VPSDNYNAKTFAKQPIGAGPYRLVSFQPGQQLIVEANPYYTGKKNDFNRLVFVFLDEDNAYAAAQSGQLDLVRIAPSMAV
TPQQKNLKLWVRDSVENRGIVFPMVPAGKKDAEGNPIGNDITADVAIRRAINYAINRQQLADTLMEGHAIPAYSAVQGLP
WQNPDIAFKDGDIAKAKAILDQAGWVPGKDGIREKSGQAARLTLWYASGDSTRRDIAEAVRATLQPLGIAITLKSGSWET
VERNMHANPTLFGWGSLDPMELYHHYSGKAAGVEYYNPGYYSNPAVERHLQQAVDAPDWRKALPFWQQVEWDGQQGAGVQ
GDAAWAWLLNIQHTYLANPCINLGKGAPEIHGSWSLLNNLDDWTWTCR
>Mature_528_residues
MNIGQITLLSCALTLSMQAPLMAAGPSTASHTLKMAIGAEPTEGFDPMLGWSHGSYFLLHAPLLRQKPDMSWDNLLTEKI
STSDDGKTWILTLKPDLKFSDGSALTAEDVVFTYNKAAQSGGKIDMGNFSQAHALDDRRIEITLSAPQSTFVNVLGSLGI
VPSDNYNAKTFAKQPIGAGPYRLVSFQPGQQLIVEANPYYTGKKNDFNRLVFVFLDEDNAYAAAQSGQLDLVRIAPSMAV
TPQQKNLKLWVRDSVENRGIVFPMVPAGKKDAEGNPIGNDITADVAIRRAINYAINRQQLADTLMEGHAIPAYSAVQGLP
WQNPDIAFKDGDIAKAKAILDQAGWVPGKDGIREKSGQAARLTLWYASGDSTRRDIAEAVRATLQPLGIAITLKSGSWET
VERNMHANPTLFGWGSLDPMELYHHYSGKAAGVEYYNPGYYSNPAVERHLQQAVDAPDWRKALPFWQQVEWDGQQGAGVQ
GDAAWAWLLNIQHTYLANPCINLGKGAPEIHGSWSLLNNLDDWTWTCR

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789887, Length=405, Percent_Identity=25.4320987654321, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787052, Length=340, Percent_Identity=25.5882352941176, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787762, Length=446, Percent_Identity=24.4394618834081, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789966, Length=511, Percent_Identity=23.8747553816047, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789397, Length=434, Percent_Identity=23.0414746543779, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57884; Mature: 57884

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGQITLLSCALTLSMQAPLMAAGPSTASHTLKMAIGAEPTEGFDPMLGWSHGSYFLLH
CCCCCEEHEEEEEHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
APLLRQKPDMSWDNLLTEKISTSDDGKTWILTLKPDLKFSDGSALTAEDVVFTYNKAAQS
CHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCEECCEEEEECHHHCC
GGKIDMGNFSQAHALDDRRIEITLSAPQSTFVNVLGSLGIVPSDNYNAKTFAKQPIGAGP
CCCEECCCCCHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC
YRLVSFQPGQQLIVEANPYYTGKKNDFNRLVFVFLDEDNAYAAAQSGQLDLVRIAPSMAV
EEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEECCCEEE
TPQQKNLKLWVRDSVENRGIVFPMVPAGKKDAEGNPIGNDITADVAIRRAINYAINRQQL
CCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHH
ADTLMEGHAIPAYSAVQGLPWQNPDIAFKDGDIAKAKAILDQAGWVPGKDGIREKSGQAA
HHHHHCCCCCCHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCHHCCCCEE
RLTLWYASGDSTRRDIAEAVRATLQPLGIAITLKSGSWETVERNMHANPTLFGWGSLDPM
EEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCEEECCCCCHH
ELYHHYSGKAAGVEYYNPGYYSNPAVERHLQQAVDAPDWRKALPFWQQVEWDGQQGAGVQ
HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCCCCCC
GDAAWAWLLNIQHTYLANPCINLGKGAPEIHGSWSLLNNLDDWTWTCR
CCCEEEEEEECCHHHHCCCCHHCCCCCCCCCCCHHHHCCCCCCEEEEC
>Mature Secondary Structure
MNIGQITLLSCALTLSMQAPLMAAGPSTASHTLKMAIGAEPTEGFDPMLGWSHGSYFLLH
CCCCCEEHEEEEEHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
APLLRQKPDMSWDNLLTEKISTSDDGKTWILTLKPDLKFSDGSALTAEDVVFTYNKAAQS
CHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCEECCEEEEECHHHCC
GGKIDMGNFSQAHALDDRRIEITLSAPQSTFVNVLGSLGIVPSDNYNAKTFAKQPIGAGP
CCCEECCCCCHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC
YRLVSFQPGQQLIVEANPYYTGKKNDFNRLVFVFLDEDNAYAAAQSGQLDLVRIAPSMAV
EEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEECCCEEE
TPQQKNLKLWVRDSVENRGIVFPMVPAGKKDAEGNPIGNDITADVAIRRAINYAINRQQL
CCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHH
ADTLMEGHAIPAYSAVQGLPWQNPDIAFKDGDIAKAKAILDQAGWVPGKDGIREKSGQAA
HHHHHCCCCCCHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCHHCCCCEE
RLTLWYASGDSTRRDIAEAVRATLQPLGIAITLKSGSWETVERNMHANPTLFGWGSLDPM
EEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCEEECCCCCHH
ELYHHYSGKAAGVEYYNPGYYSNPAVERHLQQAVDAPDWRKALPFWQQVEWDGQQGAGVQ
HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCCCCCC
GDAAWAWLLNIQHTYLANPCINLGKGAPEIHGSWSLLNNLDDWTWTCR
CCCEEEEEEECCHHHHCCCCHHCCCCCCCCCCCHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]