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The map label for this gene is ydjN [H]

Identifier: 238919631

GI number: 238919631

Start: 1686397

End: 1687788

Strand: Reverse

Name: ydjN [H]

Synonym: NT01EI_1732

Alternate gene names: 238919631

Gene position: 1687788-1686397 (Counterclockwise)

Preceding gene: 238919632

Following gene: 238919629

Centisome position: 44.27

GC content: 60.92

Gene sequence:

>1392_bases
ATGAATCTACCGCTTACCGGCAATGTAATTGCGTTTGTCGCCTTGCTGCTGCTTCTGGCCCGCTCGCGCCATACCCACTG
GAGTCTGTCGAAAAAGGTCTTGGTGGGATTGGTTATCGGGGTGCTGTTCGGTCTGGCACTACAGCTGATCTATGGTGCCG
ACAATCCGGTGCTGAAAAGTTCGATCGCCTGGTTCAACATCATCGGTAACGGTTATGTTCGTCTGCTGCAAATGATCGTG
ATGCCGCTGGTTTTCATCTCGATCCTCAGCGCCGTGGTAAAGCTGCACAATGCCGCCTCGCTGGGTAAGATCAGCCTGCT
GGCCATCGGTACCCTACTGTTTACGACCCTGATCGCCGCGCTGGTTGGCGTGGGCGTAACCGATCTGTTCGGCCTGACCG
CCAACGGACTGGTTCAGGGGGGGCAAGAGAGTGCCCGACTGCAGGTACTGCAGGGAAGCTATGCCGGTAAGGTCGCCGAT
CTGACGGTGCCGCAGCTGCTACTCTCCTTTATTCCTAGAAACCCCTTTGCAGAGCTGACCGGCGCCAACCCCACCTCGAT
CATCAGCGTGGTGATCTTTGCCGCCATTCTTGGCAGCGCGGCACTGCAGCTGCTCAAAGACGACGCCGAGCGGGGGCCGC
GGGTCGTACAGGGCATCGATACCCTGCAGGCAGTGGTGATGAAACTGGTTCGTCAGGTAATGAAGCTAACGCCTTACGGG
GTGCTGGCGCTTATGACCACGGTCGTTGCCAGTTCTAACCTGCAGGACATCATTAAGCTGGGTGGCTTTGTCGTCGCCTC
CTACCTGGGGCTGGCGATCATGTTCGTGGTTCACGCGCTGATCCTCGCGCTGGTCGGGATCAACCCGCTGCGCTTTTTCC
GCAAGGTGTGGCCGGTACTGACCTTTGCCTTTACCAGCCGCTCCAGCGCCGCCAGCATCCCTCTCAACGTGGAGGCGCAG
ACGCGCCGCATTGGCATTCCCGACGCCATCGCCAGCTTCTCTGCCTCGTTTGGCGCCACCATTGGCCAGAACGGCTGCGC
CGGGCTCTACCCCGCCATGCTGGCGGTGATGGTCGCCCCCACCGTCGGGATCAACCCGTTTGACCCGATCTGGATAACCA
CGCTGATCGGGGTGGTCACCATCAGCTCTGCCGGGGTCGCCGGCGTGGGCGGCGGTGCGACCTTCGCTGCCCTGATCGTC
CTGCCTGCAATGGGACTGCCGGTCACGCTGGTTGCGTTGCTGATCTCTGTTGAGCCGCTGATCGATATGGGCCGAACCGC
CCTCAATGTCAACGGCGCCATGACCGCTGGCGCCGTTACCAGCCAGCTGCTGCGCCAGACCGATCGCCAGATCCTTGACG
CAGCGGAGGAGACCGACCTTTCTCGCCACTGA

Upstream 100 bases:

>100_bases
GGGTGTTGCCCATAACCATACAATGACGGATCAGCCCGTTACCGCTGGTGCTCAATCGCGTTGCCGGTAGGATGGTCCGG
GACTGAATGAGGATTTAGGG

Downstream 100 bases:

>100_bases
TCCCCACCCGGCGATCTATAGCACGACAGCGGGGGCCTATGGCCCCCGCGCGCTTTCGGCTCTCCGCTAACGCGTAGTCC
ATTGAATAGCATCATGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNLPLTGNVIAFVALLLLLARSRHTHWSLSKKVLVGLVIGVLFGLALQLIYGADNPVLKSSIAWFNIIGNGYVRLLQMIV
MPLVFISILSAVVKLHNAASLGKISLLAIGTLLFTTLIAALVGVGVTDLFGLTANGLVQGGQESARLQVLQGSYAGKVAD
LTVPQLLLSFIPRNPFAELTGANPTSIISVVIFAAILGSAALQLLKDDAERGPRVVQGIDTLQAVVMKLVRQVMKLTPYG
VLALMTTVVASSNLQDIIKLGGFVVASYLGLAIMFVVHALILALVGINPLRFFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRIGIPDAIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPFDPIWITTLIGVVTISSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVNGAMTAGAVTSQLLRQTDRQILDAAEETDLSRH

Sequences:

>Translated_463_residues
MNLPLTGNVIAFVALLLLLARSRHTHWSLSKKVLVGLVIGVLFGLALQLIYGADNPVLKSSIAWFNIIGNGYVRLLQMIV
MPLVFISILSAVVKLHNAASLGKISLLAIGTLLFTTLIAALVGVGVTDLFGLTANGLVQGGQESARLQVLQGSYAGKVAD
LTVPQLLLSFIPRNPFAELTGANPTSIISVVIFAAILGSAALQLLKDDAERGPRVVQGIDTLQAVVMKLVRQVMKLTPYG
VLALMTTVVASSNLQDIIKLGGFVVASYLGLAIMFVVHALILALVGINPLRFFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRIGIPDAIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPFDPIWITTLIGVVTISSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVNGAMTAGAVTSQLLRQTDRQILDAAEETDLSRH
>Mature_463_residues
MNLPLTGNVIAFVALLLLLARSRHTHWSLSKKVLVGLVIGVLFGLALQLIYGADNPVLKSSIAWFNIIGNGYVRLLQMIV
MPLVFISILSAVVKLHNAASLGKISLLAIGTLLFTTLIAALVGVGVTDLFGLTANGLVQGGQESARLQVLQGSYAGKVAD
LTVPQLLLSFIPRNPFAELTGANPTSIISVVIFAAILGSAALQLLKDDAERGPRVVQGIDTLQAVVMKLVRQVMKLTPYG
VLALMTTVVASSNLQDIIKLGGFVVASYLGLAIMFVVHALILALVGINPLRFFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRIGIPDAIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPFDPIWITTLIGVVTISSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVNGAMTAGAVTSQLLRQTDRQILDAAEETDLSRH

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468566, Length=279, Percent_Identity=28.673835125448, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI223468564, Length=272, Percent_Identity=28.3088235294118, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI194239697, Length=468, Percent_Identity=22.8632478632479, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI21314632, Length=438, Percent_Identity=25.3424657534247, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI5032093, Length=411, Percent_Identity=26.5206812652068, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI66773030, Length=420, Percent_Identity=25.7142857142857, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI169790839, Length=437, Percent_Identity=23.1121281464531, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI40254478, Length=235, Percent_Identity=28.0851063829787, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4827012, Length=297, Percent_Identity=27.9461279461279, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=77.3218142548596, Blast_Score=684, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=456, Percent_Identity=25.8771929824561, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789947, Length=429, Percent_Identity=22.8438228438228, Blast_Score=100, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983106, Length=423, Percent_Identity=27.1867612293144, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71983099, Length=423, Percent_Identity=27.1867612293144, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71996953, Length=467, Percent_Identity=22.4839400428266, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193206505, Length=443, Percent_Identity=23.9277652370203, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17541374, Length=449, Percent_Identity=24.2761692650334, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193206654, Length=435, Percent_Identity=25.0574712643678, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17537407, Length=450, Percent_Identity=25.3333333333333, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24583025, Length=439, Percent_Identity=25.2847380410023, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17137668, Length=439, Percent_Identity=25.2847380410023, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24583023, Length=439, Percent_Identity=25.2847380410023, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48440; Mature: 48440

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]