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The map label for this gene is yobD [C]

Identifier: 238919619

GI number: 238919619

Start: 1673972

End: 1674442

Strand: Reverse

Name: yobD [C]

Synonym: NT01EI_1718

Alternate gene names: 238919619

Gene position: 1674442-1673972 (Counterclockwise)

Preceding gene: 238919620

Following gene: 238919614

Centisome position: 43.92

GC content: 50.74

Gene sequence:

>471_bases
ATGTCTTTAACCGATATCGCCCTGTTGGTCTTTATCGTGCTGTTTCTGCTATACGCCATCTATGACGAAGCCATTATGCC
GCGCCAACGCAGTGCGACCTTGCTACGGGTGAATCTGAAGCGACGCAATAAGGCCGATAGTCTAATCTTTATCGGGCTGC
TGGCGATCCTTGTCTACCGCAACATCAGCGATCAGGGTGCCCCGTTTACCACTTGGCTACTGGCAACCCTCATGGTGGTC
GCCATCTATATTTTTTACCTACGCTGGCCCAAACTGTTGTTTAAACAGCAGGGGTTCTACTATGGCAATGTGTTTATCGA
TTATGCCCGCATCCGCGGTATGAACCTGTCTGAAGACGGCTTTCTGGTTATCGATCTGGAAAAACGGCGTCTGCTGATCC
AGGTGGCCAACCTGGACTCACTGGACGAGATCTTTAAGTTCCTGCTGGAGCACCAGCAAAAGCCAGCGTAA

Upstream 100 bases:

>100_bases
TCTTCGGTTACTGGATCGGCCTGCTAGGTCAGTAATCTCCCCGGCACCGGACCGCTCAGGCCATCCGGTGCCGTTTTACC
CCCTGCCTGCGGAGTTGTCC

Downstream 100 bases:

>100_bases
GGGAGGCCGCGCCTGCTCCCCTTTCCGCCGCCTCAGTCGCGGCGGTAAACCCGGATCAGAAAGTCAGTCTCACACTCAAA
CGCCTCACGCGCCTGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSLTDIALLVFIVLFLLYAIYDEAIMPRQRSATLLRVNLKRRNKADSLIFIGLLAILVYRNISDQGAPFTTWLLATLMVV
AIYIFYLRWPKLLFKQQGFYYGNVFIDYARIRGMNLSEDGFLVIDLEKRRLLIQVANLDSLDEIFKFLLEHQQKPA

Sequences:

>Translated_156_residues
MSLTDIALLVFIVLFLLYAIYDEAIMPRQRSATLLRVNLKRRNKADSLIFIGLLAILVYRNISDQGAPFTTWLLATLMVV
AIYIFYLRWPKLLFKQQGFYYGNVFIDYARIRGMNLSEDGFLVIDLEKRRLLIQVANLDSLDEIFKFLLEHQQKPA
>Mature_155_residues
SLTDIALLVFIVLFLLYAIYDEAIMPRQRSATLLRVNLKRRNKADSLIFIGLLAILVYRNISDQGAPFTTWLLATLMVVA
IYIFYLRWPKLLFKQQGFYYGNVFIDYARIRGMNLSEDGFLVIDLEKRRLLIQVANLDSLDEIFKFLLEHQQKPA

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family

Homologues:

Organism=Escherichia coli, GI1788123, Length=152, Percent_Identity=52.6315789473684, Blast_Score=175, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1718_EDWI9 (C5BDX6)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002933134.1
- GeneID:   7958951
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_1718
- OMA:   RVRNIDN
- ProtClustDB:   PRK02913
- HAMAP:   MF_01071
- InterPro:   IPR009328
- PIRSF:   PIRSF020687
- ProDom:   PD091196

Pfam domain/function: PF06173 DUF986

EC number: NA

Molecular weight: Translated: 18225; Mature: 18094

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1cc6519c)-; HASH(0x1cc13b50)-; HASH(0x1ceece50)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDIALLVFIVLFLLYAIYDEAIMPRQRSATLLRVNLKRRNKADSLIFIGLLAILVYR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHH
NISDQGAPFTTWLLATLMVVAIYIFYLRWPKLLFKQQGFYYGNVFIDYARIRGMNLSEDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHEEEHHHHCCCCCCCCC
FLVIDLEKRRLLIQVANLDSLDEIFKFLLEHQQKPA
EEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
SLTDIALLVFIVLFLLYAIYDEAIMPRQRSATLLRVNLKRRNKADSLIFIGLLAILVYR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHH
NISDQGAPFTTWLLATLMVVAIYIFYLRWPKLLFKQQGFYYGNVFIDYARIRGMNLSEDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHEEEHHHHCCCCCCCCC
FLVIDLEKRRLLIQVANLDSLDEIFKFLLEHQQKPA
EEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA