| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919613
Identifier: 238919613
GI number: 238919613
Start: 1669885
End: 1670043
Strand: Reverse
Name: 238919613
Synonym: NT01EI_1712
Alternate gene names: NA
Gene position: 1670043-1669885 (Counterclockwise)
Preceding gene: 238919614
Following gene: 238919612
Centisome position: 43.81
GC content: 52.2
Gene sequence:
>159_bases TTGGGTCGTTATCGCTGGGTTGTAGAGCGAACTCATGGGTGGTTAGCGGGTTTTGGCAAGCTGGGTATTCGTTTCGAACG GCGGCTGGATACCCATCTTGCATTGCTGACGCTGGCTTGTGCTGTTATCTGCTTGCGCTTTGTTGAGCGGTTTTGTTAG
Upstream 100 bases:
>100_bases CCACGATATCGGCCTGACAAGCTACACGCAGACAAGGGGTATGATTTTCGCCGTTGCCGGGATTATCTGAGGCGACGGGG AATCAGATAGCAATGACCGC
Downstream 100 bases:
>100_bases CGGCTCTAAGTCCAAGCTCTGAGAGCCTTCGAGCCTGTACATAAATTTGTGTAATTGCCTGATTTTGATATGTTCAATCC AACATCAAAAGCAGGTTACT
Product: transposase for insertion sequence element
Products: NA
Alternate protein names: Transposase; Transposase IS4 Family; Transposase Is4-Like; Transposase Protein
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MGRYRWVVERTHGWLAGFGKLGIRFERRLDTHLALLTLACAVICLRFVERFC
Sequences:
>Translated_52_residues MGRYRWVVERTHGWLAGFGKLGIRFERRLDTHLALLTLACAVICLRFVERFC >Mature_51_residues GRYRWVVERTHGWLAGFGKLGIRFERRLDTHLALLTLACAVICLRFVERFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6138; Mature: 6007
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYRWVVERTHGWLAGFGKLGIRFERRLDTHLALLTLACAVICLRFVERFC CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GRYRWVVERTHGWLAGFGKLGIRFERRLDTHLALLTLACAVICLRFVERFC CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA