| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is galU [H]
Identifier: 238919563
GI number: 238919563
Start: 1620370
End: 1621281
Strand: Direct
Name: galU [H]
Synonym: NT01EI_1662
Alternate gene names: 238919563
Gene position: 1620370-1621281 (Clockwise)
Preceding gene: 238919562
Following gene: 238919565
Centisome position: 42.5
GC content: 50.22
Gene sequence:
>912_bases ATGTCAACGTCAGTGAGAAAAGTAAAAAAAGCCGTGATTCCGGTGGCTGGATTGGGAACGCGTATGCTGCCGGCAACGAA AGCTATTCCGAAAGAAATGTTGCCGCTGGTAGATAAGCCGCTGATCCAGTATGTGGTGAATGAGTGTATTGCCGCCGGTA TTAATGAGATCATTTTAGTCACGCATTCATCGAAGAACTCCATCGAGAACCACTTTGATACCAGCTTTGAGCTGGAGGCT ATCCTGGAGAAGCGCGTTAAGCGTCAGCTGCTGGCCGAGGTTCAGGCTATTTGTCCCAAACACGTGACTATTATGCAAGT GCGTCAGGGGTTGGCTAAAGGTTTAGGTCACGCTATTCTATGCGCACATCCGCTGGTGGGCGATGAGCCTTTTGCCGTGA TATTGCCTGACGTTATTTTGGATGAGTACAGCGCAGATTTAAGCAGCGATAACCTGAGTGAGATGCTGCGTCGCTATGAG TCCACCGGTGCCAGCCAGATTATGGTTGAACCGGTGCCGATGGCCGATGTATCTAATTATGGTGTGGTGGATTGCTGCGG TGCGCAATTGACTGCAGGGGAAAGCATTGCTATTCGCGCGGTGGTCGAAAAACCGCCACGCGATAAGGCACCGTCTAATC TGTCTATCGTTGGCCGCTATGTTCTTTCTCCGGATATTTGGCCATTGCTGTCTAAAACTCCACCGGGAGCTGGTGAGGAA ATTCAGCTAACGGATGCGATTGCCATGCTGCTGAAGAATGAAACCGTTGAGGCTTACCACCTGAAAGGGCGTAGCCATGA CTGTGGAAATAAGCTGGGCTATATGCAGGCGTTTGTTGAGTATGGACTGCGTCATCCTGCGTTGGGTGAAGATTTTGCGG CCTGGATCAAGGGGCTGAATTTAAGCAAGTAA
Upstream 100 bases:
>100_bases TGCGCGCGATTACCGAGCTGGTATACTCGCTGAGAGTTTTGCATTCATATCGTTCGTTTATGGACGAGCGAACAATGCGC CATTCGTATAGAGGAGTTGT
Downstream 100 bases:
>100_bases ATTGGTAAAAAATAAAAGTGGCGCTCTTAGGGGCGTCATTTTTTTTGCCATAATGCAACTAGACAAAGGTATGGGGTAGT TAATACCTATAATTGATTAA
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSTSVRKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILVTHSSKNSIENHFDTSFELEA ILEKRVKRQLLAEVQAICPKHVTIMQVRQGLAKGLGHAILCAHPLVGDEPFAVILPDVILDEYSADLSSDNLSEMLRRYE STGASQIMVEPVPMADVSNYGVVDCCGAQLTAGESIAIRAVVEKPPRDKAPSNLSIVGRYVLSPDIWPLLSKTPPGAGEE IQLTDAIAMLLKNETVEAYHLKGRSHDCGNKLGYMQAFVEYGLRHPALGEDFAAWIKGLNLSK
Sequences:
>Translated_303_residues MSTSVRKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILVTHSSKNSIENHFDTSFELEA ILEKRVKRQLLAEVQAICPKHVTIMQVRQGLAKGLGHAILCAHPLVGDEPFAVILPDVILDEYSADLSSDNLSEMLRRYE STGASQIMVEPVPMADVSNYGVVDCCGAQLTAGESIAIRAVVEKPPRDKAPSNLSIVGRYVLSPDIWPLLSKTPPGAGEE IQLTDAIAMLLKNETVEAYHLKGRSHDCGNKLGYMQAFVEYGLRHPALGEDFAAWIKGLNLSK >Mature_302_residues STSVRKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILVTHSSKNSIENHFDTSFELEAI LEKRVKRQLLAEVQAICPKHVTIMQVRQGLAKGLGHAILCAHPLVGDEPFAVILPDVILDEYSADLSSDNLSEMLRRYES TGASQIMVEPVPMADVSNYGVVDCCGAQLTAGESIAIRAVVEKPPRDKAPSNLSIVGRYVLSPDIWPLLSKTPPGAGEEI QLTDAIAMLLKNETVEAYHLKGRSHDCGNKLGYMQAFVEYGLRHPALGEDFAAWIKGLNLSK
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=297, Percent_Identity=80.4713804713805, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI1788355, Length=291, Percent_Identity=58.4192439862543, Blast_Score=338, Evalue=3e-94,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32958; Mature: 32827
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSVRKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILV CCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE THSSKNSIENHFDTSFELEAILEKRVKRQLLAEVQAICPKHVTIMQVRQGLAKGLGHAIL EECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEE CAHPLVGDEPFAVILPDVILDEYSADLSSDNLSEMLRRYESTGASQIMVEPVPMADVSNY EECCCCCCCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC GVVDCCGAQLTAGESIAIRAVVEKPPRDKAPSNLSIVGRYVLSPDIWPLLSKTPPGAGEE CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCE IQLTDAIAMLLKNETVEAYHLKGRSHDCGNKLGYMQAFVEYGLRHPALGEDFAAWIKGLN EEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC LSK CCC >Mature Secondary Structure STSVRKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILV CCHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE THSSKNSIENHFDTSFELEAILEKRVKRQLLAEVQAICPKHVTIMQVRQGLAKGLGHAIL EECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEE CAHPLVGDEPFAVILPDVILDEYSADLSSDNLSEMLRRYESTGASQIMVEPVPMADVSNY EECCCCCCCCCEEECHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC GVVDCCGAQLTAGESIAIRAVVEKPPRDKAPSNLSIVGRYVLSPDIWPLLSKTPPGAGEE CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCE IQLTDAIAMLLKNETVEAYHLKGRSHDCGNKLGYMQAFVEYGLRHPALGEDFAAWIKGLN EEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC LSK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]