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The map label for this gene is ychJ [C]

Identifier: 238919561

GI number: 238919561

Start: 1618382

End: 1618864

Strand: Reverse

Name: ychJ [C]

Synonym: NT01EI_1660

Alternate gene names: 238919561

Gene position: 1618864-1618382 (Counterclockwise)

Preceding gene: 238919564

Following gene: 238919560

Centisome position: 42.46

GC content: 57.14

Gene sequence:

>483_bases
ATGAAATTACGCCATCCTCTTGATGCGCCCTGCCCCTGCGGCAGCGAGCGCGCATTTTCTGACTGCTGCGCCCCTTATCT
GAACGGAGAACAGCGGGCGACAACGCCGGAGCAGCTGATGCGCTCACGCTACAGCGCCTTTGTCACCCACCATGCTGACT
ATCTGATTGCCACCTGGCATCCCGATTGCCAAATGGCTGCGGAGCGCGATGCGATTATCGCCAGCTTTGACGACACTCAG
TGGCTGGGACTCCGCGTTATCGCCAGTATGCCGGGCCGCGATGTACATGAAGGGTTTGTGGAGTTTATCGCCCGCTTCCA
TACGCCCTCTACACATACAAACGGTGCTATTCACGAACGATCGCGTTTTCTGGATCTCAATCACGCTTGGTACTATGTTG
ATGGAGCCCGGCCCACGGTAGGACGCAATGACCCCTGCCCGTGCGCCAGCGGCAACAAATATAAAAAATGCTGCGGACGC
TAG

Upstream 100 bases:

>100_bases
CTACAGCAGATATTGGTTATTATGACCAGAATATCAGAATAGAAGCCGGGCGATATTGCGCCTAACCTTTTCTCACCAAT
AGTTGCAAATGGTTATTCCT

Downstream 100 bases:

>100_bases
GCTGCGTCCCGCCCTGAACGGGGGAATTGACACTCCCTTCTCGGTGGACGTCGTGATAACGGCCCGGCAAGAACAAGGAT
GCCAACACATGTCACAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKLRHPLDAPCPCGSERAFSDCCAPYLNGEQRATTPEQLMRSRYSAFVTHHADYLIATWHPDCQMAAERDAIIASFDDTQ
WLGLRVIASMPGRDVHEGFVEFIARFHTPSTHTNGAIHERSRFLDLNHAWYYVDGARPTVGRNDPCPCASGNKYKKCCGR

Sequences:

>Translated_160_residues
MKLRHPLDAPCPCGSERAFSDCCAPYLNGEQRATTPEQLMRSRYSAFVTHHADYLIATWHPDCQMAAERDAIIASFDDTQ
WLGLRVIASMPGRDVHEGFVEFIARFHTPSTHTNGAIHERSRFLDLNHAWYYVDGARPTVGRNDPCPCASGNKYKKCCGR
>Mature_160_residues
MKLRHPLDAPCPCGSERAFSDCCAPYLNGEQRATTPEQLMRSRYSAFVTHHADYLIATWHPDCQMAAERDAIIASFDDTQ
WLGLRVIASMPGRDVHEGFVEFIARFHTPSTHTNGAIHERSRFLDLNHAWYYVDGARPTVGRNDPCPCASGNKYKKCCGR

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=150, Percent_Identity=56.6666666666667, Blast_Score=172, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18058; Mature: 18058

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRHPLDAPCPCGSERAFSDCCAPYLNGEQRATTPEQLMRSRYSAFVTHHADYLIATWH
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
PDCQMAAERDAIIASFDDTQWLGLRVIASMPGRDVHEGFVEFIARFHTPSTHTNGAIHER
CCCHHHCCCCEEEEECCCCCHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
SRFLDLNHAWYYVDGARPTVGRNDPCPCASGNKYKKCCGR
HHEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKLRHPLDAPCPCGSERAFSDCCAPYLNGEQRATTPEQLMRSRYSAFVTHHADYLIATWH
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
PDCQMAAERDAIIASFDDTQWLGLRVIASMPGRDVHEGFVEFIARFHTPSTHTNGAIHER
CCCHHHCCCCEEEEECCCCCHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
SRFLDLNHAWYYVDGARPTVGRNDPCPCASGNKYKKCCGR
HHEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA