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The map label for this gene is msrB [H]

Identifier: 238919546

GI number: 238919546

Start: 1604934

End: 1605344

Strand: Direct

Name: msrB [H]

Synonym: NT01EI_1642

Alternate gene names: 238919546

Gene position: 1604934-1605344 (Clockwise)

Preceding gene: 238919543

Following gene: 238919547

Centisome position: 42.1

GC content: 56.69

Gene sequence:

>411_bases
ATGGCTAAAGAGAATCTCTCCCATTCCCCACATCAACTAACTGAAATGCAACGCTATGTCACTCAGCAGTGTGGTACGGA
ACCGCCGTTCAGCGGCAGGCTGCTGCATAACCGCCAGGAGGGAATATACCACTGCCTGTGCTGCAACAGTCCCTTATTCT
ATTCCGACAGTAAATATGATTCCGGCTGTGGCTGGCCGAGCTTCTTTCGCCCCTATAGCGCCGACGCCGTTCGCTGTCTG
GATGATGATTCTCACCATATGCATCGCATCGAAATCCGCTGCGCGCACTGCGATGCCCATCTGGGGCATCTGTTTCCCGA
CGGCCCCCAGCCCAGCGGCGAGCGCTATTGTGTGAACTCCGCTGCGCTACATTTTTGCGCCGGAGAGGATGGCCGCTGGA
CCCTGGGGTAA

Upstream 100 bases:

>100_bases
TAGATCAAATGATGCTGATCTATTGTTAACTCTTTGTTATGTTGAGTGGCATTTTGTCTCTACCCAATCCTACCCATCGG
CGCAGGCCGCGGAACATAAC

Downstream 100 bases:

>100_bases
CCCCTTGATGTCTTGAGGTGATAGTACCATGGTGAAGCGATTCAGCAAAGAAGATATTGGAGAGGACATATGGATATTGA
GCGCTTGATCTCAATAATGA

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAKENLSHSPHQLTEMQRYVTQQCGTEPPFSGRLLHNRQEGIYHCLCCNSPLFYSDSKYDSGCGWPSFFRPYSADAVRCL
DDDSHHMHRIEIRCAHCDAHLGHLFPDGPQPSGERYCVNSAALHFCAGEDGRWTLG

Sequences:

>Translated_136_residues
MAKENLSHSPHQLTEMQRYVTQQCGTEPPFSGRLLHNRQEGIYHCLCCNSPLFYSDSKYDSGCGWPSFFRPYSADAVRCL
DDDSHHMHRIEIRCAHCDAHLGHLFPDGPQPSGERYCVNSAALHFCAGEDGRWTLG
>Mature_135_residues
AKENLSHSPHQLTEMQRYVTQQCGTEPPFSGRLLHNRQEGIYHCLCCNSPLFYSDSKYDSGCGWPSFFRPYSADAVRCLD
DDSHHMHRIEIRCAHCDAHLGHLFPDGPQPSGERYCVNSAALHFCAGEDGRWTLG

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=114, Percent_Identity=52.6315789473684, Blast_Score=137, Evalue=2e-33,
Organism=Homo sapiens, GI301336162, Length=114, Percent_Identity=52.6315789473684, Blast_Score=137, Evalue=2e-33,
Organism=Homo sapiens, GI73089054, Length=114, Percent_Identity=52.6315789473684, Blast_Score=137, Evalue=2e-33,
Organism=Homo sapiens, GI37620216, Length=114, Percent_Identity=52.6315789473684, Blast_Score=137, Evalue=2e-33,
Organism=Homo sapiens, GI117606353, Length=122, Percent_Identity=51.6393442622951, Blast_Score=129, Evalue=8e-31,
Organism=Escherichia coli, GI1788077, Length=125, Percent_Identity=66.4, Blast_Score=188, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI17553450, Length=109, Percent_Identity=51.3761467889908, Blast_Score=112, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI115532676, Length=109, Percent_Identity=51.3761467889908, Blast_Score=112, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6319816, Length=119, Percent_Identity=41.1764705882353, Blast_Score=95, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24645799, Length=119, Percent_Identity=45.3781512605042, Blast_Score=116, Evalue=4e-27,
Organism=Drosophila melanogaster, GI45553335, Length=119, Percent_Identity=45.3781512605042, Blast_Score=116, Evalue=5e-27,
Organism=Drosophila melanogaster, GI21356369, Length=119, Percent_Identity=45.3781512605042, Blast_Score=116, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24645801, Length=130, Percent_Identity=43.0769230769231, Blast_Score=113, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24645804, Length=130, Percent_Identity=43.0769230769231, Blast_Score=113, Evalue=4e-26,
Organism=Drosophila melanogaster, GI221378664, Length=115, Percent_Identity=46.0869565217391, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI221378662, Length=123, Percent_Identity=43.0894308943089, Blast_Score=108, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 15414; Mature: 15283

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKENLSHSPHQLTEMQRYVTQQCGTEPPFSGRLLHNRQEGIYHCLCCNSPLFYSDSKYD
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCEEECCCCCC
SGCGWPSFFRPYSADAVRCLDDDSHHMHRIEIRCAHCDAHLGHLFPDGPQPSGERYCVNS
CCCCCHHHCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECC
AALHFCAGEDGRWTLG
CEEEEEECCCCCEECC
>Mature Secondary Structure 
AKENLSHSPHQLTEMQRYVTQQCGTEPPFSGRLLHNRQEGIYHCLCCNSPLFYSDSKYD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCEEECCCCCC
SGCGWPSFFRPYSADAVRCLDDDSHHMHRIEIRCAHCDAHLGHLFPDGPQPSGERYCVNS
CCCCCHHHCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECC
AALHFCAGEDGRWTLG
CEEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA