| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yeaH [C]
Identifier: 238919540
GI number: 238919540
Start: 1597139
End: 1598410
Strand: Reverse
Name: yeaH [C]
Synonym: NT01EI_1636
Alternate gene names: 238919540
Gene position: 1598410-1597139 (Counterclockwise)
Preceding gene: 238919541
Following gene: 238919539
Centisome position: 41.93
GC content: 58.18
Gene sequence:
>1272_bases ATGGCCTACTTCATCGATCGCCGCCTGAACGGCAAGAATAAGAGCGCTGTAAACCGTCAGCGGTTCCTGCGCCGCTATAA ATCACAGATCAAACAATCGGTCGCGGATGCCATCCGCCGCCGCTCGGTCTCTGACGTAGAGAGCGGCGAATCGGTCACTA TTCCACGCGACGATATCAGCGAACCGCTGTTTCACCAAGGGAGCGGCGGCGAACGCCATCGGGTTCATCCCGGAAACGAC CACTTTGTTCCCCATGACCACATTGAACGCCAGCAGGGCGGCGGCGCCGGCGGTGGCAGCGGCGATGCCGGCAACGGCGA AGGGGGAGAGGATGACTTTGTTTTCCAGATCTCCAAGGACGAGTATCTGGATCTGCTGTTTGAAGACCTGGCTCTGCCTA ACCTGCGCCACAATCACTATCAGCAGCTGACCGAATTCAAAACCCATCGCGCCGGCTACACCGCCAACGGTGTTCCGGCC AACATCAGCGTCGTGCGCTCCCTGCAGAACTCGTTGGCGCGGCGTTCCGCCATGAGCGCAGCCAAGCGGCGTGAGCTGCA CCAGTTGGAACAACAACTCGACGCGCTGCAGCACAGCGAACCGGTGCAGCCACTGGAGACCATACGGCTACGCCAAGAGA TAGAAACGCTGCGCCAGCGTATTGCCCGGGTACCCTTTATCGACAGCATCGATCTGCGCTACAAAAACTACGAGCGACGC CCTGAGCCCTCAAGCCAGGCGGTCATGTTCTGCCTGATGGATGTCTCTGGTTCCATGGATCAGGCCACCAAAGAGATGGC CAAACGTTTCTATATACTGCTGTATCTGTTCCTGAGCCGAAACTACAAGAATATCGAGGTGGTCTATATTCGCCACCACA CCCAGGCCAAAGAGGTCGACGAACAAGAGTTTTTCTACTCTCAGGAGACCGGCGGCACCATCGTCTCCAGCGCATTGAAG CTGATGGATGAGATCATCCGCGCCCGTTATGATCCCGCCCAGTGGAACATCTATGCTGCCCAAGCCTCCGACGGAGACAA CTGGGCCGATGACTCTCCCCTATGCCAGCAGCTGCTCACGACCCGCCTGCTGCCGCTGGTACGCTACTATTGCTATATTG AAATCACCCGCCGCGCCCATCAGACCCTATGGCGGGAGTATGAGGGGCTGAGTCAACGCTGCGACAACTTTGCCATGCAG CATATCCGGGAGCCACAAGACATCTATCCGGTCTTCCGGGAGCTGTTCGCCCGTCAGGTCGCCCTCCGCTAA
Upstream 100 bases:
>100_bases CCTGCTGTGCGAGTGGTATCTGCGGGTCCGTAAATCATCCTGACAACCCGCTCCGGGCGGCGCTCTGCCGCCCTTTCCAC TTGGCAGACTGGGAGGCACC
Downstream 100 bases:
>100_bases CCCACCGCCGCCGGACAGGGCGGCGGGTAACCGTTCCGGTCATCGTCCGCCGCTCGGCAGCAGGAGCATCCTAAACACTC GGTATATCATTAAATTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MAYFIDRRLNGKNKSAVNRQRFLRRYKSQIKQSVADAIRRRSVSDVESGESVTIPRDDISEPLFHQGSGGERHRVHPGND HFVPHDHIERQQGGGAGGGSGDAGNGEGGEDDFVFQISKDEYLDLLFEDLALPNLRHNHYQQLTEFKTHRAGYTANGVPA NISVVRSLQNSLARRSAMSAAKRRELHQLEQQLDALQHSEPVQPLETIRLRQEIETLRQRIARVPFIDSIDLRYKNYERR PEPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRNYKNIEVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSALK LMDEIIRARYDPAQWNIYAAQASDGDNWADDSPLCQQLLTTRLLPLVRYYCYIEITRRAHQTLWREYEGLSQRCDNFAMQ HIREPQDIYPVFRELFARQVALR
Sequences:
>Translated_423_residues MAYFIDRRLNGKNKSAVNRQRFLRRYKSQIKQSVADAIRRRSVSDVESGESVTIPRDDISEPLFHQGSGGERHRVHPGND HFVPHDHIERQQGGGAGGGSGDAGNGEGGEDDFVFQISKDEYLDLLFEDLALPNLRHNHYQQLTEFKTHRAGYTANGVPA NISVVRSLQNSLARRSAMSAAKRRELHQLEQQLDALQHSEPVQPLETIRLRQEIETLRQRIARVPFIDSIDLRYKNYERR PEPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRNYKNIEVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSALK LMDEIIRARYDPAQWNIYAAQASDGDNWADDSPLCQQLLTTRLLPLVRYYCYIEITRRAHQTLWREYEGLSQRCDNFAMQ HIREPQDIYPVFRELFARQVALR >Mature_422_residues AYFIDRRLNGKNKSAVNRQRFLRRYKSQIKQSVADAIRRRSVSDVESGESVTIPRDDISEPLFHQGSGGERHRVHPGNDH FVPHDHIERQQGGGAGGGSGDAGNGEGGEDDFVFQISKDEYLDLLFEDLALPNLRHNHYQQLTEFKTHRAGYTANGVPAN ISVVRSLQNSLARRSAMSAAKRRELHQLEQQLDALQHSEPVQPLETIRLRQEIETLRQRIARVPFIDSIDLRYKNYERRP EPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRNYKNIEVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSALKL MDEIIRARYDPAQWNIYAAQASDGDNWADDSPLCQQLLTTRLLPLVRYYCYIEITRRAHQTLWREYEGLSQRCDNFAMQH IREPQDIYPVFRELFARQVALR
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family
Homologues:
Organism=Escherichia coli, GI1788084, Length=424, Percent_Identity=76.8867924528302, Blast_Score=674, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1636_EDWI9 (C5B9W9)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933055.1 - GeneID: 7961964 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1636 - OMA: IVFIRHT - ProtClustDB: PRK05325 - HAMAP: MF_01232 - InterPro: IPR006698
Pfam domain/function: PF04285 DUF444
EC number: NA
Molecular weight: Translated: 49011; Mature: 48880
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYFIDRRLNGKNKSAVNRQRFLRRYKSQIKQSVADAIRRRSVSDVESGESVTIPRDDIS CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEECCHHHCC EPLFHQGSGGERHRVHPGNDHFVPHDHIERQQGGGAGGGSGDAGNGEGGEDDFVFQISKD CCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCH EYLDLLFEDLALPNLRHNHYQQLTEFKTHRAGYTANGVPANISVVRSLQNSLARRSAMSA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AKRRELHQLEQQLDALQHSEPVQPLETIRLRQEIETLRQRIARVPFIDSIDLRYKNYERR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC PEPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRNYKNIEVVYIRHHTQAKEVD CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCC EQEFFYSQETGGTIVSSALKLMDEIIRARYDPAQWNIYAAQASDGDNWADDSPLCQQLLT HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH TRLLPLVRYYCYIEITRRAHQTLWREYEGLSQRCDNFAMQHIREPQDIYPVFRELFARQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALR CCC >Mature Secondary Structure AYFIDRRLNGKNKSAVNRQRFLRRYKSQIKQSVADAIRRRSVSDVESGESVTIPRDDIS CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEECCHHHCC EPLFHQGSGGERHRVHPGNDHFVPHDHIERQQGGGAGGGSGDAGNGEGGEDDFVFQISKD CCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCH EYLDLLFEDLALPNLRHNHYQQLTEFKTHRAGYTANGVPANISVVRSLQNSLARRSAMSA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AKRRELHQLEQQLDALQHSEPVQPLETIRLRQEIETLRQRIARVPFIDSIDLRYKNYERR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC PEPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRNYKNIEVVYIRHHTQAKEVD CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCC EQEFFYSQETGGTIVSSALKLMDEIIRARYDPAQWNIYAAQASDGDNWADDSPLCQQLLT HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH TRLLPLVRYYCYIEITRRAHQTLWREYEGLSQRCDNFAMQHIREPQDIYPVFRELFARQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA