| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919538
Identifier: 238919538
GI number: 238919538
Start: 1594549
End: 1594806
Strand: Reverse
Name: 238919538
Synonym: NT01EI_1634
Alternate gene names: NA
Gene position: 1594806-1594549 (Counterclockwise)
Preceding gene: 238919539
Following gene: 238919537
Centisome position: 41.83
GC content: 54.65
Gene sequence:
>258_bases ATGAGTACACTCCTCGATCTGCCCGACGATAGCGTTCTATCCAATGAACACACCCATTTCGAGAATGAAGTTTCACGCGT CATCGGTGAAACCGTCAGCGATTTAATTCATCACGATGGTGATATCATTTTCGGTGATTTAATTCGTGCCTTGGCGCGCT CCGCCCGCGCAGAGGACAGCCAACAGCGTCGCGCCCTGCTGCTTTGCGCCATAGACCGGCTGCTGGGCGATCAGCCGACA CAAAGCCTCCGCTCCTGA
Upstream 100 bases:
>100_bases TAATTAAACCATTTACATCGTCTACACGCGTCTCGGTGCTGATACTGTTCCAGTCGGACAGTCCCTGAGCCCTTTCTGCC ATATCCAGGGGAATTTCACT
Downstream 100 bases:
>100_bases TCGCTGTCACGGGGCCTCGGCCCCCCCTCGCTTTTTTCCGCAACATGTGGCAACACATGGGGCTGGCACAGCAGCCTATG CTGCGTTATGGTGATTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSTLLDLPDDSVLSNEHTHFENEVSRVIGETVSDLIHHDGDIIFGDLIRALARSARAEDSQQRRALLLCAIDRLLGDQPT QSLRS
Sequences:
>Translated_85_residues MSTLLDLPDDSVLSNEHTHFENEVSRVIGETVSDLIHHDGDIIFGDLIRALARSARAEDSQQRRALLLCAIDRLLGDQPT QSLRS >Mature_84_residues STLLDLPDDSVLSNEHTHFENEVSRVIGETVSDLIHHDGDIIFGDLIRALARSARAEDSQQRRALLLCAIDRLLGDQPTQ SLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9466; Mature: 9334
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLDLPDDSVLSNEHTHFENEVSRVIGETVSDLIHHDGDIIFGDLIRALARSARAEDS CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH QQRRALLLCAIDRLLGDQPTQSLRS HHHHHHHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure STLLDLPDDSVLSNEHTHFENEVSRVIGETVSDLIHHDGDIIFGDLIRALARSARAEDS CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH QQRRALLLCAIDRLLGDQPTQSLRS HHHHHHHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA