| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pykA [H]
Identifier: 238919509
GI number: 238919509
Start: 1566624
End: 1568066
Strand: Reverse
Name: pykA [H]
Synonym: NT01EI_1605
Alternate gene names: 238919509
Gene position: 1568066-1566624 (Counterclockwise)
Preceding gene: 238919510
Following gene: 238919505
Centisome position: 41.13
GC content: 59.11
Gene sequence:
>1443_bases ATGTCCAGACGGCTCAGAAGAACCAAAATTGTTACCACGCTTGGCCCGGCTACCGATCGCGACAATAATCTGGAAAAGAT TATCTCTGCCGGTGCCAACGTGATGCGCCTTAACTTTTCACACGGCACGCCGGAAGATCACCAGCAACGCGCCAACAAAG TCCGTGAAATTGCCGCCAAACTCGGTCGTCATGTCGCCATTCTCGGGGACCTGCAGGGTCCTAAAATCCGGGTATCCACC TTTAAGGAAGGTAAAGTTTTCCTCAACGTTGGGGACAAGTTCCTGCTGGATGCCACTCTGAACAAGGGCGAAGGCGATAA AGAAAAGGTCGGCATCGACTATAAGCGGCTGCCGGAAGATGTGGTGCCGGGCGATATCCTGCTGCTCGACGATGGCCGTG TACAGCTGAAAGTGCTCTCCGTACAGGAAGATAAGGTATTCACCGAGGTCACTGTGGGCGGGCCGCTGTCCAACAACAAA GGGATCAACAAGCTGGGCGGTGGGCTCTCTGCCGATGCCCTGACGGAAAAGGACAAGGCCGATATCCTGACTGCCGCCAG GATTGGCGTCGACTATCTGGCTGTCTCCTTCCCACGCTGCGGAGAGGATCTCAACTATGCCCGCCGTCTGGCGCGCGATG CCGACAGCGAAGCCAAGATCGTGGCCAAAGTCGAGCGCGCCGAGGCGGTCGCCAGCGACGAAGCGATGGATGATGTGATC CTGGCCGCCGATGTTGTGATGGTCGCTCGTGGCGATCTGGGGGTTGAAATTGGCGATCCGGAGCTGGTGGGGATCCAGAA AAAACTGATCCGGCGCGCCCGCAAGCTGAACCGTGTCGTGATCACCGCGACCCAGATGATGGAGTCCATGATCACCAACC CAATGCCGACCCGCGCGGAGGTCATGGACGTAGCCAACGCCGTACTGGACGGTACCGATGCCGTCATGCTGTCTGCCGAA ACCGCCGCGGGCCAATACCCGGCCGAAACCGTAGCCGCCATGGCGCGCGTCTGCCTGGGCGCAGAGAAGATCCCCAGCAT CAATATCTCCAAGCACCGTATTGATGACCAGTTCGACAATACGGAAGAGGCCGTCGCCATGTCCGCCATGTACGCGGCCA ACCACCTCAAGGGGGTAACAGCCATCATCGCGATGACGGAGTCCGGGCGCACTGCGTTGATGATGTCCCGTATCAGCTCC GGTCTGCCGATCTTCGCCATGTCCCGTCATGAGCGCACCCTGAACCTGACCGCACTGTACCGCGGTGTCACACCGGTGCA CTTTGACAGCCACACCGACGGCGTTGCCGCGGCTCAGGCTGCGGCCAATCTGCTACGGGATAAAGGGTTCCTGCTCTCCG GTGATCTGGTGATCGTCACACAGGGTGATCAGATGGATACCATCGGCAGCACCAACACCTGCCGCACCCTGCGCGTAGAG TAA
Upstream 100 bases:
>100_bases CCAGTGGGGCTATCCGGGTAATCGCGGCGGCATTGAGCCGGTGCATTTGCCCACCGTTGTATTGGCAATACCAATGCGTT ACATGTCAATGGAGTTATGC
Downstream 100 bases:
>100_bases TCAGGTCTGCCATACGCAGCGGGGGCGCCTGGCGCCCCCGTTTTTCATTATGCCTTCGCCACGGCATACAGCATCAACAC AATGAACAGCACTGTACCTG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MSRRLRRTKIVTTLGPATDRDNNLEKIISAGANVMRLNFSHGTPEDHQQRANKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKVFLNVGDKFLLDATLNKGEGDKEKVGIDYKRLPEDVVPGDILLLDDGRVQLKVLSVQEDKVFTEVTVGGPLSNNK GINKLGGGLSADALTEKDKADILTAARIGVDYLAVSFPRCGEDLNYARRLARDADSEAKIVAKVERAEAVASDEAMDDVI LAADVVMVARGDLGVEIGDPELVGIQKKLIRRARKLNRVVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPAETVAAMARVCLGAEKIPSINISKHRIDDQFDNTEEAVAMSAMYAANHLKGVTAIIAMTESGRTALMMSRISS GLPIFAMSRHERTLNLTALYRGVTPVHFDSHTDGVAAAQAAANLLRDKGFLLSGDLVIVTQGDQMDTIGSTNTCRTLRVE
Sequences:
>Translated_480_residues MSRRLRRTKIVTTLGPATDRDNNLEKIISAGANVMRLNFSHGTPEDHQQRANKVREIAAKLGRHVAILGDLQGPKIRVST FKEGKVFLNVGDKFLLDATLNKGEGDKEKVGIDYKRLPEDVVPGDILLLDDGRVQLKVLSVQEDKVFTEVTVGGPLSNNK GINKLGGGLSADALTEKDKADILTAARIGVDYLAVSFPRCGEDLNYARRLARDADSEAKIVAKVERAEAVASDEAMDDVI LAADVVMVARGDLGVEIGDPELVGIQKKLIRRARKLNRVVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAE TAAGQYPAETVAAMARVCLGAEKIPSINISKHRIDDQFDNTEEAVAMSAMYAANHLKGVTAIIAMTESGRTALMMSRISS GLPIFAMSRHERTLNLTALYRGVTPVHFDSHTDGVAAAQAAANLLRDKGFLLSGDLVIVTQGDQMDTIGSTNTCRTLRVE >Mature_479_residues SRRLRRTKIVTTLGPATDRDNNLEKIISAGANVMRLNFSHGTPEDHQQRANKVREIAAKLGRHVAILGDLQGPKIRVSTF KEGKVFLNVGDKFLLDATLNKGEGDKEKVGIDYKRLPEDVVPGDILLLDDGRVQLKVLSVQEDKVFTEVTVGGPLSNNKG INKLGGGLSADALTEKDKADILTAARIGVDYLAVSFPRCGEDLNYARRLARDADSEAKIVAKVERAEAVASDEAMDDVIL AADVVMVARGDLGVEIGDPELVGIQKKLIRRARKLNRVVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAET AAGQYPAETVAAMARVCLGAEKIPSINISKHRIDDQFDNTEEAVAMSAMYAANHLKGVTAIIAMTESGRTALMMSRISSG LPIFAMSRHERTLNLTALYRGVTPVHFDSHTDGVAAAQAAANLLRDKGFLLSGDLVIVTQGDQMDTIGSTNTCRTLRVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=504, Percent_Identity=36.7063492063492, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI33286420, Length=504, Percent_Identity=36.7063492063492, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI33286418, Length=497, Percent_Identity=36.6197183098592, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI32967597, Length=493, Percent_Identity=34.6855983772819, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI10835121, Length=493, Percent_Identity=34.6855983772819, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=34.2560553633218, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=34.2560553633218, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=33.1914893617021, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=33.1914893617021, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=32.7102803738318, Blast_Score=96, Evalue=7e-20, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=89.375, Blast_Score=870, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=476, Percent_Identity=37.3949579831933, Blast_Score=280, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=36.6803278688525, Blast_Score=271, Evalue=8e-73, Organism=Caenorhabditis elegans, GI17506831, Length=493, Percent_Identity=36.7139959432049, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71984413, Length=493, Percent_Identity=36.7139959432049, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17506829, Length=493, Percent_Identity=36.7139959432049, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71984406, Length=493, Percent_Identity=36.7139959432049, Blast_Score=245, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6324923, Length=489, Percent_Identity=35.3783231083845, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6319279, Length=475, Percent_Identity=35.3684210526316, Blast_Score=247, Evalue=2e-66, Organism=Drosophila melanogaster, GI24648964, Length=496, Percent_Identity=36.6935483870968, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI28571814, Length=496, Percent_Identity=36.6935483870968, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24581235, Length=493, Percent_Identity=32.4543610547667, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24648966, Length=417, Percent_Identity=35.0119904076739, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI24646914, Length=277, Percent_Identity=36.101083032491, Blast_Score=142, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51799; Mature: 51668
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLRRTKIVTTLGPATDRDNNLEKIISAGANVMRLNFSHGTPEDHQQRANKVREIAAK CCCCCCHHEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKVFLNVGDKFLLDATLNKGEGDKEKVGIDYKRLPED HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEEEECCCCCCCHHHCCCCHHHCCHH VVPGDILLLDDGRVQLKVLSVQEDKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKA CCCCCEEEEECCCEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHCCCCCCHHHCCCCHH DILTAARIGVDYLAVSFPRCGEDLNYARRLARDADSEAKIVAKVERAEAVASDEAMDDVI HHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LAADVVMVARGDLGVEIGDPELVGIQKKLIRRARKLNRVVITATQMMESMITNPMPTRAE HHHHEEEEECCCCCEEECCCCEEHHHHHHHHHHHHHCEEEEEHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMARVCLGAEKIPSINISKHRIDDQFDN HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHCCCCCCHHHHCCCCCCC TEEAVAMSAMYAANHLKGVTAIIAMTESGRTALMMSRISSGLPIFAMSRHERTLNLTALY HHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEHC RGVTPVHFDSHTDGVAAAQAAANLLRDKGFLLSGDLVIVTQGDQMDTIGSTNTCRTLRVE CCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure SRRLRRTKIVTTLGPATDRDNNLEKIISAGANVMRLNFSHGTPEDHQQRANKVREIAAK CCCCCHHEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH LGRHVAILGDLQGPKIRVSTFKEGKVFLNVGDKFLLDATLNKGEGDKEKVGIDYKRLPED HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEEEECCCCCCCHHHCCCCHHHCCHH VVPGDILLLDDGRVQLKVLSVQEDKVFTEVTVGGPLSNNKGINKLGGGLSADALTEKDKA CCCCCEEEEECCCEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHCCCCCCHHHCCCCHH DILTAARIGVDYLAVSFPRCGEDLNYARRLARDADSEAKIVAKVERAEAVASDEAMDDVI HHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LAADVVMVARGDLGVEIGDPELVGIQKKLIRRARKLNRVVITATQMMESMITNPMPTRAE HHHHEEEEECCCCCEEECCCCEEHHHHHHHHHHHHHCEEEEEHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMARVCLGAEKIPSINISKHRIDDQFDN HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHCCCCCCHHHHCCCCCCC TEEAVAMSAMYAANHLKGVTAIIAMTESGRTALMMSRISSGLPIFAMSRHERTLNLTALY HHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEHC RGVTPVHFDSHTDGVAAAQAAANLLRDKGFLLSGDLVIVTQGDQMDTIGSTNTCRTLRVE CCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]