Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919449

Identifier: 238919449

GI number: 238919449

Start: 1510348

End: 1510470

Strand: Direct

Name: 238919449

Synonym: NT01EI_1543

Alternate gene names: NA

Gene position: 1510348-1510470 (Clockwise)

Preceding gene: 238919448

Following gene: 238919452

Centisome position: 39.62

GC content: 43.09

Gene sequence:

>123_bases
ATGAATCGCTTTCGCCGGGTAATGACCCTATGGGAAAAGACGTCTGAAAATTACGAGGCCATGCTGCATTTTCTCCGTGG
TCTTATGGTCTGGAATAAAATTCTAATTGAGATAGGCTCTTAG

Upstream 100 bases:

>100_bases
TTATGAGCCGCATATCCACTCCCGTAAAGGGGAATCAGATGCCAGTAAAACCACAAACTTCAAGGCTTATCGCTGGGTCG
TCGAGAGGAGGCATAGCTGG

Downstream 100 bases:

>100_bases
AGCCTATCTTATTAAGCTATTTGATTTGCCATTTTAGTCTTGGACCGTGCTTATAATCCTCACGTACTGTGTGTACGCTC
CGGTTGTTGCGCGCTGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MNRFRRVMTLWEKTSENYEAMLHFLRGLMVWNKILIEIGS

Sequences:

>Translated_40_residues
MNRFRRVMTLWEKTSENYEAMLHFLRGLMVWNKILIEIGS
>Mature_40_residues
MNRFRRVMTLWEKTSENYEAMLHFLRGLMVWNKILIEIGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4915; Mature: 4915

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFRRVMTLWEKTSENYEAMLHFLRGLMVWNKILIEIGS
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRFRRVMTLWEKTSENYEAMLHFLRGLMVWNKILIEIGS
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA