Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919442

Identifier: 238919442

GI number: 238919442

Start: 1500179

End: 1501117

Strand: Direct

Name: 238919442

Synonym: NT01EI_1536

Alternate gene names: NA

Gene position: 1500179-1501117 (Clockwise)

Preceding gene: 238919441

Following gene: 238919443

Centisome position: 39.35

GC content: 53.78

Gene sequence:

>939_bases
ATGACCGGCATTCCCGTGACAAAGCAGACGTTCAGGAGCACCAACTGGCACAACTACAACAAAGCCCTCGTCAATCGTGG
CTCCGTCACTTTCTGGCTGGATGACGAAGCGATTCAAGCCTGGTATGAGTCAGCAACGCCCGCAGCACGGGGACGACCTC
AGCGCTATTCTGCCCTCGCTATCACCACTGTCCTGGTGGTTAAATGCGTCTTCCGGCTGACCCTCCGGGCCGCACAGGGC
TTTATTGATTCTATTTTTACCCTGATGGGGGTCCCTCTGCGCAGTCCGGATTACACCAGTGTCAGCAAGCGGGCAAAGTC
GGTTAATGTCAGTTTTAAAACACCCACCCGAGGTGAGATAGCGCATCTGGTAATTGATTCCACAGGGCTGAAAGTCTTCG
GCGAAGGTGAGTGGAAAATCAAAAAACAGGGCAAAGAACGCCGTCGTGTCTGGCGGAAACTGCATCTGGCTGTTGATGCG
CGCACGCATGAGGTTATTTGCGCGGATCTGTCGCTGAATAACGTTACCGATGCTGAAGCTTTCCCTGGACTTGTCCGGCA
GACCCACCGGAAAATCAGGGCAGCAGCGGCGGACGGTGCTTACGACACCCGGCGGTGTCACGATGAATTACGGCGTAAGA
AAATCAGCACCCTTATTCCTCCTCGAAAGGGAGCGGATTACTGGCCGGGTGAGTATGCAGATCGTAATCGCGCTGTTGCG
AATCAGCGGCTAAGAGGGAGTAATGCACGGTGGAAACGGACAACAGATTATAACCGCCGGTCGATAGCAGAAACGGCGAT
GTACAGAATTAAACAACTGTTTGGTGGTTCACTAACGCTACGGGAGTATGATGCGCAGGTTGCAGAGGCTTTGGCCATGG
TGCGTGCGCTGAATAAAATGACGAAGGCAGGAATGCCTGAAAGTGAGCGCATTGCCTGA

Upstream 100 bases:

>100_bases
GCTTACCCGAAGGACAATCTGCTTCTCCAAATCAGAAGAAATGCACGATAAGGTCATCGGCTGGTATCTAACAATCAACC
ATTACCACTAAATTTGAGTC

Downstream 100 bases:

>100_bases
CAGCAGCAATCGCCTGCTGGGCTGCTTACCAAAAATCTGATTTAGAGCCGCTAACAAAACCGAGTTGATTCGAATAACAT
CAATCCCCATATAGTAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTGIPVTKQTFRSTNWHNYNKALVNRGSVTFWLDDEAIQAWYESATPAARGRPQRYSALAITTVLVVKCVFRLTLRAAQG
FIDSIFTLMGVPLRSPDYTSVSKRAKSVNVSFKTPTRGEIAHLVIDSTGLKVFGEGEWKIKKQGKERRRVWRKLHLAVDA
RTHEVICADLSLNNVTDAEAFPGLVRQTHRKIRAAAADGAYDTRRCHDELRRKKISTLIPPRKGADYWPGEYADRNRAVA
NQRLRGSNARWKRTTDYNRRSIAETAMYRIKQLFGGSLTLREYDAQVAEALAMVRALNKMTKAGMPESERIA

Sequences:

>Translated_312_residues
MTGIPVTKQTFRSTNWHNYNKALVNRGSVTFWLDDEAIQAWYESATPAARGRPQRYSALAITTVLVVKCVFRLTLRAAQG
FIDSIFTLMGVPLRSPDYTSVSKRAKSVNVSFKTPTRGEIAHLVIDSTGLKVFGEGEWKIKKQGKERRRVWRKLHLAVDA
RTHEVICADLSLNNVTDAEAFPGLVRQTHRKIRAAAADGAYDTRRCHDELRRKKISTLIPPRKGADYWPGEYADRNRAVA
NQRLRGSNARWKRTTDYNRRSIAETAMYRIKQLFGGSLTLREYDAQVAEALAMVRALNKMTKAGMPESERIA
>Mature_311_residues
TGIPVTKQTFRSTNWHNYNKALVNRGSVTFWLDDEAIQAWYESATPAARGRPQRYSALAITTVLVVKCVFRLTLRAAQGF
IDSIFTLMGVPLRSPDYTSVSKRAKSVNVSFKTPTRGEIAHLVIDSTGLKVFGEGEWKIKKQGKERRRVWRKLHLAVDAR
THEVICADLSLNNVTDAEAFPGLVRQTHRKIRAAAADGAYDTRRCHDELRRKKISTLIPPRKGADYWPGEYADRNRAVAN
QRLRGSNARWKRTTDYNRRSIAETAMYRIKQLFGGSLTLREYDAQVAEALAMVRALNKMTKAGMPESERIA

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 35356; Mature: 35225

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIPVTKQTFRSTNWHNYNKALVNRGSVTFWLDDEAIQAWYESATPAARGRPQRYSALA
CCCCCCCHHHHHCCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHH
ITTVLVVKCVFRLTLRAAQGFIDSIFTLMGVPLRSPDYTSVSKRAKSVNVSFKTPTRGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCE
AHLVIDSTGLKVFGEGEWKIKKQGKERRRVWRKLHLAVDARTHEVICADLSLNNVTDAEA
EEEEEECCCCEEEECCCEEEHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH
FPGLVRQTHRKIRAAAADGAYDTRRCHDELRRKKISTLIPPRKGADYWPGEYADRNRAVA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
NQRLRGSNARWKRTTDYNRRSIAETAMYRIKQLFGGSLTLREYDAQVAEALAMVRALNKM
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TKAGMPESERIA
HHCCCCCCCCCC
>Mature Secondary Structure 
TGIPVTKQTFRSTNWHNYNKALVNRGSVTFWLDDEAIQAWYESATPAARGRPQRYSALA
CCCCCCHHHHHCCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHH
ITTVLVVKCVFRLTLRAAQGFIDSIFTLMGVPLRSPDYTSVSKRAKSVNVSFKTPTRGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCE
AHLVIDSTGLKVFGEGEWKIKKQGKERRRVWRKLHLAVDARTHEVICADLSLNNVTDAEA
EEEEEECCCCEEEECCCEEEHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH
FPGLVRQTHRKIRAAAADGAYDTRRCHDELRRKKISTLIPPRKGADYWPGEYADRNRAVA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
NQRLRGSNARWKRTTDYNRRSIAETAMYRIKQLFGGSLTLREYDAQVAEALAMVRALNKM
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TKAGMPESERIA
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]