| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919432
Identifier: 238919432
GI number: 238919432
Start: 1489669
End: 1490373
Strand: Direct
Name: 238919432
Synonym: NT01EI_1526
Alternate gene names: NA
Gene position: 1489669-1490373 (Clockwise)
Preceding gene: 238919431
Following gene: 238919433
Centisome position: 39.08
GC content: 51.21
Gene sequence:
>705_bases ATGTACAAGTGGATCCTGCCATTCTTATTTATCATCAATCATGCCTATGCCTTCACCGTTGATTCCATGTTTAAGGTGGA CAGTGAAAACAGCCGTTACTTTACCTTAAAAAACCCGGATGACGAGCCGGTTTACCTTGCGGTCTCATTAAGCGAATTAC AGCGTGCGGGGAAGGGGCGTTATCAGGAGAGTGCGCTCTCCCCGGATGATTTTTTAACATGGCCGCTCTATATTGATCCG ATGGATATCGTTATTGATGCTAAGGGGGAATTACGCGTCTCGGTTATCCGTACCGCTCAAATTACCCCGCACGACCGTAT TATTGGTGTCAGCTTTATTCCCGACAGTTTACGCCAGCAGGAGCAGGGCGAAAAAAGCAATGTCGCCATCGCCATTGGCT ATAAGTCGTGGTATCTGATCCCCGGCAGCCAGCGTATTACCGGAGAGCCACAGGCCTGGCTAAGTAACCGGAAGATTCAT TTCAGTAACCCGACCAATAAGGTATTGCGCCTGATCCTGGATGTCTGCCCGGCCAAAGAAAAGCAAGCCGGCAGTGACGC CTGCTACAGCGAAGCCATTTTACTCCCCGGCAATGACAAGCAGATCCCCGTCCCGGATGCGGCCGATCTGGAGCGGGGGA AGGTGACCTTTTTTGACCTTGCTGAGCAGTATAAAAAAGAGATCGCCCTGCGCCCGGCCAGATAA
Upstream 100 bases:
>100_bases TGATCACGCTTTAATCATTAAATTCTATTTTCAGTCTGTAATGCTATCCGGTGATGAATATATCGCCGGATAATTTGTCG CTGTCTCCAGGGTGATTTCA
Downstream 100 bases:
>100_bases GGAAATTACCCATCGTCTGTCAGACAGCAGCCTGCGCTAACGCGCCTGACAGGGTGTCACCCGGCTTGAAGATGAAGATG ACCATGACGAGTTTCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIH FSNPTNKVLRLILDVCPAKEKQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR
Sequences:
>Translated_234_residues MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIH FSNPTNKVLRLILDVCPAKEKQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR >Mature_234_residues MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIH FSNPTNKVLRLILDVCPAKEKQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26538; Mature: 26538
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGR CCHHHHHHHHHHHHHHEEEECCEEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCC YQESALSPDDFLTWPLYIDPMDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQ CHHHCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHH EQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIHFSNPTNKVLRLILDVCPAKE HCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCC KQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR CCCCCCCHHHCEEEECCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYKWILPFLFIINHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGR CCHHHHHHHHHHHHHHEEEECCEEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCC YQESALSPDDFLTWPLYIDPMDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQ CHHHCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHH EQGEKSNVAIAIGYKSWYLIPGSQRITGEPQAWLSNRKIHFSNPTNKVLRLILDVCPAKE HCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHHCCCEEEECCCHHHHHHHHHHHCCCCC KQAGSDACYSEAILLPGNDKQIPVPDAADLERGKVTFFDLAEQYKKEIALRPAR CCCCCCCHHHCEEEECCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1371766 [H]