Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919424

Identifier: 238919424

GI number: 238919424

Start: 1484280

End: 1484720

Strand: Direct

Name: 238919424

Synonym: NT01EI_1518

Alternate gene names: NA

Gene position: 1484280-1484720 (Clockwise)

Preceding gene: 238919423

Following gene: 238919428

Centisome position: 38.93

GC content: 45.12

Gene sequence:

>441_bases
ATGAAAAAATACGTTATGGCCTGCGCCCTGACCTTGATATATAACGTTTCATTCGCGGCACCGCTGCAATGCGTTAAAAC
CGATCCGGCACAAATCGCTGCGCTATTTGACCAGTGGAATAACTCGCTACAAAGCGGCGATCCTCAAAAGGTCACCGATA
ACTATTTAACTGATGCAGTATTACTCCCCACCGTCTCTAGCAAAACCAAGCTGACTCAAGACGATCGCATTACATATTTC
AAGCGGTTCCTGGAGAAAAAGCCCCATGGGAAGATAGATAATCGCACGATAAAAATTGGCTGTAATCATGCTATAGACAC
AGGAACCTATACCTTCACCTTTGCAGATAACAGTAAAATCTCGGCTCGCTATACATTTACCTATGCTTGGGACGGTAACG
CGTGGAAAATATCAACACACCACTCATCGGTGATGCCGTAG

Upstream 100 bases:

>100_bases
AAAAACTGGTCTATGCTTAGGTGACCATCCGTTCATGAACGCTGAGTTGTAACTTGATGTTGCTTTAAACGTAACCCATA
ATATGAAAGGAGTAACTGTG

Downstream 100 bases:

>100_bases
GGCCCTGATCAGCACCGCCCCCTCTTGCCAGTCCATACGGCTGGACTGGCCAGTGGCAGCCACATCTCTATCGATTACCT
TGACCAAAATTGGCAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Kinase; Protein With A Cystatin-Like Fold; Secreted Protein; Exported Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAVLLPTVSSKTKLTQDDRITYF
KRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKISARYTFTYAWDGNAWKISTHHSSVMP

Sequences:

>Translated_146_residues
MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAVLLPTVSSKTKLTQDDRITYF
KRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKISARYTFTYAWDGNAWKISTHHSSVMP
>Mature_146_residues
MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAVLLPTVSSKTKLTQDDRITYF
KRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKISARYTFTYAWDGNAWKISTHHSSVMP

Specific function: Unknown

COG id: COG4875

COG function: function code S; Uncharacterized protein conserved in bacteria with a cystatin-like fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16493; Mature: 16493

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAV
CCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEE
LLPTVSSKTKLTQDDRITYFKRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKI
EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEE
SARYTFTYAWDGNAWKISTHHSSVMP
EEEEEEEEEECCCEEEEECCCCCCCC
>Mature Secondary Structure
MKKYVMACALTLIYNVSFAAPLQCVKTDPAQIAALFDQWNNSLQSGDPQKVTDNYLTDAV
CCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEE
LLPTVSSKTKLTQDDRITYFKRFLEKKPHGKIDNRTIKIGCNHAIDTGTYTFTFADNSKI
EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEE
SARYTFTYAWDGNAWKISTHHSSVMP
EEEEEEEEEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA