| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cya [H]
Identifier: 238919418
GI number: 238919418
Start: 1479781
End: 1480974
Strand: Reverse
Name: cya [H]
Synonym: NT01EI_1512
Alternate gene names: 238919418
Gene position: 1480974-1479781 (Counterclockwise)
Preceding gene: 238919419
Following gene: 238919415
Centisome position: 38.85
GC content: 35.51
Gene sequence:
>1194_bases ATGAAAATCGGATATGACCTTTCAGTAGTACTTCCTTGTCAGTACAGTAAGGAATTCGCAAAAAATAATGATCGGATTAG TTGCGATGACGAGATGCAAATATTAATAAATTCCATTAAGGATAATACAGGGATAGCACATGAACATTTATTACCACTTC AACGTCTAGCTAATGAAATAAATTGCATTATATCTTTCCGCCCCGTAGATAATTTGGCAACTGAGTTAATCGAATCAGGA TATCCAACTAAAGGGTTTCATATTAAAGGGAAAAGTGCATCTTGGGGGCCTCAAACAGGATTTATCTGTGAGGAACAACG CTTTAGTAAGCTGGAAGATGCACCTGTTGAATGTATAGACAATTTCAATCAACAAGTAAAACAATGTATAAGTGAAAGAC ATGCTTTTTCTGTGGATTTGACGATAAACAAAAAACGGCTTAATACATTATTTGAAAAAGGGGTTATTGATGATATTTCT GTTGAAAACACTAATGGAGTCCGTACTTTTAAAGCTCAAGGACCCAGCGGCAAATATTACTTTTTTGAAGCAAGAAAAAT ATTAGACTCTAATGAGGAAGATTATCTTATATTAAATGAGAATAAACCGATTAGAGTCTTAGCACCGGAAATGAGTTCTA AGGCATTCACTGCTGACTACGACCTGTTTATAGCTTCTCCACATATCAGTGATTTTGGCTCACAAGATAACTTACTTATT CCTGATGTTGCACATAAAGTATTTCAGCATCGAGTGAACTCGTATCATAAAGAACTAACAACTAATCATGAGCTAATGCA AGACTATTCTAACGCCGATAGTTTCTATAAGAACGAAGATCCTGATATTGGTAATGCATCAGCACGTGTCCGAATATTGA TAGATTTAATTAATGCAACATTGGTCGGAGACGGTGAGAGGCTTGTGCATCATAGTATGGATTGTATCAACCCTGCCACG GATTTGTCACTTAGTTATCCCGCAACCTTTGCATTGCCGATAAAAATAGGCCGATTTGATAAATTGTGCATTATTAACAA CAATGATGAATTAAAAGAACTAATAAACGATGCCAGGAGTTCAGGATACTATATTAAAATAAATCCACTATGGGAAAAGG AACTGGGTAAAATAGATTCTCAGAGATTTAAGGATGCGAAGGTTAAATTAGATCCGTTAACAAAACCGAGTTGA
Upstream 100 bases:
>100_bases TCTGAAAATTACGAGGCCATGCTGCATTTTACCTGTGGTCTTATTGTCTGGAATAAAGTCCTATTGAAATAGGCTCTAAA TCTATTTATGAGTGTTCGAC
Downstream 100 bases:
>100_bases TTCGAATAACATCAATCCCCACATAGCAGGCATGACACGAAAAATCATCAGTAAGGACCCTGTACACGATTCTGTGTAAA TGCCTTTTCTCAGAAGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase; Anthrax edema toxin adenylate cyclase component; Edema factor; EF [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKIGYDLSVVLPCQYSKEFAKNNDRISCDDEMQILINSIKDNTGIAHEHLLPLQRLANEINCIISFRPVDNLATELIESG YPTKGFHIKGKSASWGPQTGFICEEQRFSKLEDAPVECIDNFNQQVKQCISERHAFSVDLTINKKRLNTLFEKGVIDDIS VENTNGVRTFKAQGPSGKYYFFEARKILDSNEEDYLILNENKPIRVLAPEMSSKAFTADYDLFIASPHISDFGSQDNLLI PDVAHKVFQHRVNSYHKELTTNHELMQDYSNADSFYKNEDPDIGNASARVRILIDLINATLVGDGERLVHHSMDCINPAT DLSLSYPATFALPIKIGRFDKLCIINNNDELKELINDARSSGYYIKINPLWEKELGKIDSQRFKDAKVKLDPLTKPS
Sequences:
>Translated_397_residues MKIGYDLSVVLPCQYSKEFAKNNDRISCDDEMQILINSIKDNTGIAHEHLLPLQRLANEINCIISFRPVDNLATELIESG YPTKGFHIKGKSASWGPQTGFICEEQRFSKLEDAPVECIDNFNQQVKQCISERHAFSVDLTINKKRLNTLFEKGVIDDIS VENTNGVRTFKAQGPSGKYYFFEARKILDSNEEDYLILNENKPIRVLAPEMSSKAFTADYDLFIASPHISDFGSQDNLLI PDVAHKVFQHRVNSYHKELTTNHELMQDYSNADSFYKNEDPDIGNASARVRILIDLINATLVGDGERLVHHSMDCINPAT DLSLSYPATFALPIKIGRFDKLCIINNNDELKELINDARSSGYYIKINPLWEKELGKIDSQRFKDAKVKLDPLTKPS >Mature_397_residues MKIGYDLSVVLPCQYSKEFAKNNDRISCDDEMQILINSIKDNTGIAHEHLLPLQRLANEINCIISFRPVDNLATELIESG YPTKGFHIKGKSASWGPQTGFICEEQRFSKLEDAPVECIDNFNQQVKQCISERHAFSVDLTINKKRLNTLFEKGVIDDIS VENTNGVRTFKAQGPSGKYYFFEARKILDSNEEDYLILNENKPIRVLAPEMSSKAFTADYDLFIASPHISDFGSQDNLLI PDVAHKVFQHRVNSYHKELTTNHELMQDYSNADSFYKNEDPDIGNASARVRILIDLINATLVGDGERLVHHSMDCINPAT DLSLSYPATFALPIKIGRFDKLCIINNNDELKELINDARSSGYYIKINPLWEKELGKIDSQRFKDAKVKLDPLTKPS
Specific function: One of the three proteins composing the anthrax toxin, the agent which infects many mammalian species and that may cause death. EF is a calmodulin-dependent adenylyl cyclase that, when associated with PA, causes edema. EF is not toxic by itself and it is
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylyl cyclase class-2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005165 - InterPro: IPR003541 - InterPro: IPR014781 [H]
Pfam domain/function: PF03497 Anthrax_toxA; PF07737 ATLF [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 45028; Mature: 45028
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGYDLSVVLPCQYSKEFAKNNDRISCDDEMQILINSIKDNTGIAHEHLLPLQRLANEI CCCCCCEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHE NCIISFRPVDNLATELIESGYPTKGFHIKGKSASWGPQTGFICEEQRFSKLEDAPVECID EEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECHHHHHHCCCCHHHHHH NFNQQVKQCISERHAFSVDLTINKKRLNTLFEKGVIDDISVENTNGVRTFKAQGPSGKYY HHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEE FFEARKILDSNEEDYLILNENKPIRVLAPEMSSKAFTADYDLFIASPHISDFGSQDNLLI EEEEHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEECCCEEEEECCCCCCCCCCCCEEC PDVAHKVFQHRVNSYHKELTTNHELMQDYSNADSFYKNEDPDIGNASARVRILIDLINAT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEHHHH LVGDGERLVHHSMDCINPATDLSLSYPATFALPIKIGRFDKLCIINNNDELKELINDARS EECCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHC SGYYIKINPLWEKELGKIDSQRFKDAKVKLDPLTKPS CCEEEEECCCCHHHHCCHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MKIGYDLSVVLPCQYSKEFAKNNDRISCDDEMQILINSIKDNTGIAHEHLLPLQRLANEI CCCCCCEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHE NCIISFRPVDNLATELIESGYPTKGFHIKGKSASWGPQTGFICEEQRFSKLEDAPVECID EEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECHHHHHHCCCCHHHHHH NFNQQVKQCISERHAFSVDLTINKKRLNTLFEKGVIDDISVENTNGVRTFKAQGPSGKYY HHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEE FFEARKILDSNEEDYLILNENKPIRVLAPEMSSKAFTADYDLFIASPHISDFGSQDNLLI EEEEHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEECCCEEEEECCCCCCCCCCCCEEC PDVAHKVFQHRVNSYHKELTTNHELMQDYSNADSFYKNEDPDIGNASARVRILIDLINAT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEHHHH LVGDGERLVHHSMDCINPATDLSLSYPATFALPIKIGRFDKLCIINNNDELKELINDARS EECCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHC SGYYIKINPLWEKELGKIDSQRFKDAKVKLDPLTKPS CCEEEEECCCCHHHHCCHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2906312; 3149607; 2834337; 10515943; 12004073; 12067380; 9398214; 11207582; 2114169; 11737637; 2108958; 1900429; 11553601; 10926933; 11807546; 8418825; 11544370 [H]