Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919410

Identifier: 238919410

GI number: 238919410

Start: 1474856

End: 1475461

Strand: Direct

Name: 238919410

Synonym: NT01EI_1504

Alternate gene names: NA

Gene position: 1474856-1475461 (Clockwise)

Preceding gene: 238919409

Following gene: 238919411

Centisome position: 38.69

GC content: 62.38

Gene sequence:

>606_bases
GTGAATAAACGTCAGGTAAGCGTGGGGATTGGGTTAAGTCTCGGGCTGTGGCTGAGCGGCGCAGCGCAGGGCTTTGAGCT
GCGCAATAACGCTCAGGTGCTGGAAGAGCGGCTGGAGCTGAGCGCGCAAATCGATATGGGCAGCACGCTGATGCTGCCGG
TGCAGGTGATAAGTCAGACGCCCCTGTTTCAGCAGGTGGCGTATGAGGTGTGGCGCCATCGTTTTGAGGATATGGGCATC
GCCCTGCGGGCGATAGGCGAGCAGAACAGCCAGCCGCTGCTGCTGGAGTTAGTGAACGACCAGTACCAGTGTGTGAGCCT
TCCCCCGGCCCCTGTGCTTCTGCTGGCGGCCGTCAACCGGGGATATCAGTACCTCGTGGAAACAGGGGGGCGGCAGGTTG
CCAATCTGAAGAGCGATGGTCTCCGCCAGCACCGTTTTGAGCCGGGAGAGTGGCAGCGCGCGGGGGATGTGGCGGGTATC
GCGGCAAACCGCTTTACTCTGGACTTCTATCTCCGCGTGGTCCTGCCGGAACTCTCGCGGGTTCCCAGAGGGATGGGGGT
CGTCTGCAACGGGCAGGTCACCCTGCTGCTGAGCGTGCCGCTCTGA

Upstream 100 bases:

>100_bases
ACCGGGGCGATTACCCTGCTGTCTGAGGGGCGGCCATGTGCCTCGCTCTCTTCGGCGCTGCAGCTGCCGGCCGATCAACT
ACCCATCGTGGAGTGTAAGA

Downstream 100 bases:

>100_bases
GAGGTATCGCGGCCCTGAGCCGGCGGTGTGATGTTATGTCAGGAGGAAGTATGTATTGCGTAATAGGGGAAAGGCTGCTG
CGTTATCTGATGTATGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNKRQVSVGIGLSLGLWLSGAAQGFELRNNAQVLEERLELSAQIDMGSTLMLPVQVISQTPLFQQVAYEVWRHRFEDMGI
ALRAIGEQNSQPLLLELVNDQYQCVSLPPAPVLLLAAVNRGYQYLVETGGRQVANLKSDGLRQHRFEPGEWQRAGDVAGI
AANRFTLDFYLRVVLPELSRVPRGMGVVCNGQVTLLLSVPL

Sequences:

>Translated_201_residues
MNKRQVSVGIGLSLGLWLSGAAQGFELRNNAQVLEERLELSAQIDMGSTLMLPVQVISQTPLFQQVAYEVWRHRFEDMGI
ALRAIGEQNSQPLLLELVNDQYQCVSLPPAPVLLLAAVNRGYQYLVETGGRQVANLKSDGLRQHRFEPGEWQRAGDVAGI
AANRFTLDFYLRVVLPELSRVPRGMGVVCNGQVTLLLSVPL
>Mature_201_residues
MNKRQVSVGIGLSLGLWLSGAAQGFELRNNAQVLEERLELSAQIDMGSTLMLPVQVISQTPLFQQVAYEVWRHRFEDMGI
ALRAIGEQNSQPLLLELVNDQYQCVSLPPAPVLLLAAVNRGYQYLVETGGRQVANLKSDGLRQHRFEPGEWQRAGDVAGI
AANRFTLDFYLRVVLPELSRVPRGMGVVCNGQVTLLLSVPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22253; Mature: 22253

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRQVSVGIGLSLGLWLSGAAQGFELRNNAQVLEERLELSAQIDMGSTLMLPVQVISQT
CCCEEEEEECCEEEHHHHCCCCCCCEECCCHHHHHHHHHHHEECCCCCEEEHHHHHHCCC
PLFQQVAYEVWRHRFEDMGIALRAIGEQNSQPLLLELVNDQYQCVSLPPAPVLLLAAVNR
CHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHCC
GYQYLVETGGRQVANLKSDGLRQHRFEPGEWQRAGDVAGIAANRFTLDFYLRVVLPELSR
CCEEEECCCCCEEECCCCCCHHHHCCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHC
VPRGMGVVCNGQVTLLLSVPL
CCCCCCEEECCCEEEEEECCC
>Mature Secondary Structure
MNKRQVSVGIGLSLGLWLSGAAQGFELRNNAQVLEERLELSAQIDMGSTLMLPVQVISQT
CCCEEEEEECCEEEHHHHCCCCCCCEECCCHHHHHHHHHHHEECCCCCEEEHHHHHHCCC
PLFQQVAYEVWRHRFEDMGIALRAIGEQNSQPLLLELVNDQYQCVSLPPAPVLLLAAVNR
CHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHCC
GYQYLVETGGRQVANLKSDGLRQHRFEPGEWQRAGDVAGIAANRFTLDFYLRVVLPELSR
CCEEEECCCCCEEECCCCCCHHHHCCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHC
VPRGMGVVCNGQVTLLLSVPL
CCCCCCEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA