Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919406

Identifier: 238919406

GI number: 238919406

Start: 1470644

End: 1471057

Strand: Direct

Name: 238919406

Synonym: NT01EI_1501

Alternate gene names: NA

Gene position: 1470644-1471057 (Clockwise)

Preceding gene: 238919405

Following gene: 238919408

Centisome position: 38.58

GC content: 48.31

Gene sequence:

>414_bases
ATGTACAAGTGGATCCTGCCATTCTTATTTATCCTCAATCATGCCTATGCCTTCACCGTTGATTCCATGTTTAAGGTGGA
CAGTGAAAACAGCCGTTACTTTACCTTAAAAAACCCGGATGACGAGCCGGTTTACCTTGCGGTCTCATTAAGCGAATTAC
AGCGTGCGGGGAAGGGGCGTTATCAGGAGAGTGCGCTCTCCCCGGATGATTTTTTAACATGGCCGCTCTATATTGATCCG
ATGGATATCGTTATTGATGCTAAGGGGGAATTACGCGTCTCGGTTATCCGTACCGCTCAAATTACCCCGCACGACCGTAT
TATTGGCGTCAGCTTTATTCCCGACAGTTTACGCCAGCAGGAGCAGGGCGAAAAAAGCAATGTCGCCATCGCCATTGGCT
ATAAGAGCCGCTAA

Upstream 100 bases:

>100_bases
TGATCACGCTTTAATCATTAAATTTTATTTTCAGTCTGTAATGCTATCCGGTGATGAATATATCGCCGGATAATTTGTCG
CTGTCTCCAGGGTGATTTCA

Downstream 100 bases:

>100_bases
CAAAACCGTTCAACAAAGCGCAAGCAGATAACAGCACAAGCCAGCGTCAGCAAGGCAAGATGGGTATCCAGCCGCCGTTC
GAAGCGAATACGCAGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MYKWILPFLFILNHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP
MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSR

Sequences:

>Translated_137_residues
MYKWILPFLFILNHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP
MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSR
>Mature_137_residues
MYKWILPFLFILNHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGRYQESALSPDDFLTWPLYIDP
MDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQEQGEKSNVAIAIGYKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15690; Mature: 15690

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKWILPFLFILNHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGR
CCHHHHHHHHHHCCHHEEEECCEEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCC
YQESALSPDDFLTWPLYIDPMDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQ
CCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHH
EQGEKSNVAIAIGYKSR
HCCCCCCEEEEEEECCC
>Mature Secondary Structure
MYKWILPFLFILNHAYAFTVDSMFKVDSENSRYFTLKNPDDEPVYLAVSLSELQRAGKGR
CCHHHHHHHHHHCCHHEEEECCEEEECCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCC
YQESALSPDDFLTWPLYIDPMDIVIDAKGELRVSVIRTAQITPHDRIIGVSFIPDSLRQQ
CCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCHHHHHH
EQGEKSNVAIAIGYKSR
HCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1371766 [H]