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The map label for this gene is chaA [H]

Identifier: 238919375

GI number: 238919375

Start: 1443026

End: 1444132

Strand: Reverse

Name: chaA [H]

Synonym: NT01EI_1468

Alternate gene names: 238919375

Gene position: 1444132-1443026 (Counterclockwise)

Preceding gene: 238919379

Following gene: 238919373

Centisome position: 37.88

GC content: 61.61

Gene sequence:

>1107_bases
ATGAAGCCACATAGTAAAACCAGCCACCACAATACCCGCCACAGCGAGTATCAGCTGATCCTGCCGCTGATCGCCCTGGG
GATACTGGTGGTGACGCAGCCCACCTCGCTGGGCGCCCTGGGCGCCATTAACCTGCTGGCGCTGATCGCGATCCTCGCCA
GCGCCTTCAGCGTGGTGCGTCACGCCGATGTTCTGGCCCACCGTCTCGGCGAACCCTATGGCTCGCTGATCCTGACCCTG
TCAGTGGTGATCCTGGAGGTCAGTCTGATTTCGGCGCTGATGGTCAGCGGCAAAGCCGCACCGGAGCTGATGCGCGATAC
CCTCTACTCCATTGTAATGATCGTCAGCGGCGGACTGGTCGGCTTCTCCCTGCTGCTCGGCGGTTATAAGTTCGCCACCC
AGTATGTCAATCTGGGCGGGATCAAGCAGTACCTGATCGCGCTGATCCCGTTGGCGATCATCGTGCTGGTGCTGCCGATG
ACTCTGCCGGGGGATAACTTTAGCCACGGTCAGTCGCTGGTGGTCGCGCTGCTATCGGCCGCCATGTACGGCGTATTTCT
GCTGATCCAGACCCGTACCCATCAAAGTCTGTTCGTCTACGAGCATGAGGATGAAGGCGACGATCCCAGCGATCCGCACC
ACGGTAAGCCCTCCTCCCACTGCAATCTGTGGCACGCCACCTGGCTGGTCACCTACCTTATCGCCGTCATCGCGGTCACC
AAGCTGAACGCCATGCCGCTGGAGGGGCTGCTCGCTGCCCTGAACGCACCGCAGCAGATGACCGGCTTTCTGGTCGCGCT
GCTGATCCTCTCTCCCGAGGGGCTGGGCGCCCTGAAGGCGGTGTTGGCCAATCAGGTACAGCGTGCCATGAACCTGTTTT
TTGGCTCGGTGCTGGCGACCCTGTCGCTGACGGTGCCGACGGTAACGCTAATCGCCCTGCTGACCGATCAGCCGCTGCTG
TTCGGGCTGGGCGATCCGCAGATGGTGGTGATGCTGGCCACCCTGATGCTGTGCCAGGTCTCGTTTAGCACCGGCCGTAC
CAATGTGCTCAACGGCGCGGCGCATCTGGTGCTGTTCGTCGCCTACCTGATGACCCTGTTTCTGTAG

Upstream 100 bases:

>100_bases
TAAAAATGTTATGATATATCGTTTTTTTTGATAATGTCAGCGTAGCGCTATTCCGCCCGCTGCCGGTAAGCGCGCAGTCA
TTTGAAGGAGGGTGCCATTT

Downstream 100 bases:

>100_bases
CTGACCTTCCCCGGGCGGGTCAGCAGTTCGCCGCAGGGGATCACCCGTGGGGCCGTCACCCGTGCCCGCCCCGGCGGCTC
ATGCAGCCGGTGGGCCACCA

Product: calcium/sodium:proton antiporter

Products: Na (I) [Periplasm]; Ca (II) [Periplasm]; Proton [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKPHSKTSHHNTRHSEYQLILPLIALGILVVTQPTSLGALGAINLLALIAILASAFSVVRHADVLAHRLGEPYGSLILTL
SVVILEVSLISALMVSGKAAPELMRDTLYSIVMIVSGGLVGFSLLLGGYKFATQYVNLGGIKQYLIALIPLAIIVLVLPM
TLPGDNFSHGQSLVVALLSAAMYGVFLLIQTRTHQSLFVYEHEDEGDDPSDPHHGKPSSHCNLWHATWLVTYLIAVIAVT
KLNAMPLEGLLAALNAPQQMTGFLVALLILSPEGLGALKAVLANQVQRAMNLFFGSVLATLSLTVPTVTLIALLTDQPLL
FGLGDPQMVVMLATLMLCQVSFSTGRTNVLNGAAHLVLFVAYLMTLFL

Sequences:

>Translated_368_residues
MKPHSKTSHHNTRHSEYQLILPLIALGILVVTQPTSLGALGAINLLALIAILASAFSVVRHADVLAHRLGEPYGSLILTL
SVVILEVSLISALMVSGKAAPELMRDTLYSIVMIVSGGLVGFSLLLGGYKFATQYVNLGGIKQYLIALIPLAIIVLVLPM
TLPGDNFSHGQSLVVALLSAAMYGVFLLIQTRTHQSLFVYEHEDEGDDPSDPHHGKPSSHCNLWHATWLVTYLIAVIAVT
KLNAMPLEGLLAALNAPQQMTGFLVALLILSPEGLGALKAVLANQVQRAMNLFFGSVLATLSLTVPTVTLIALLTDQPLL
FGLGDPQMVVMLATLMLCQVSFSTGRTNVLNGAAHLVLFVAYLMTLFL
>Mature_368_residues
MKPHSKTSHHNTRHSEYQLILPLIALGILVVTQPTSLGALGAINLLALIAILASAFSVVRHADVLAHRLGEPYGSLILTL
SVVILEVSLISALMVSGKAAPELMRDTLYSIVMIVSGGLVGFSLLLGGYKFATQYVNLGGIKQYLIALIPLAIIVLVLPM
TLPGDNFSHGQSLVVALLSAAMYGVFLLIQTRTHQSLFVYEHEDEGDDPSDPHHGKPSSHCNLWHATWLVTYLIAVIAVT
KLNAMPLEGLLAALNAPQQMTGFLVALLILSPEGLGALKAVLANQVQRAMNLFFGSVLATLSLTVPTVTLIALLTDQPLL
FGLGDPQMVVMLATLMLCQVSFSTGRTNVLNGAAHLVLFVAYLMTLFL

Specific function: According to PubMed:8496184 the natural activity of this protein is as a calcium/proton antiporter, but it can act as a weak sodium/proton antiporter. The presence of a preferred substrate and normal pH cytoplasmic values might prevent significant sodium/

COG id: COG0387

COG function: function code P; Ca2+/H+ antiporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1787468, Length=358, Percent_Identity=76.2569832402235, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004713
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 39367; Mature: 39367

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPHSKTSHHNTRHSEYQLILPLIALGILVVTQPTSLGALGAINLLALIAILASAFSVVR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HADVLAHRLGEPYGSLILTLSVVILEVSLISALMVSGKAAPELMRDTLYSIVMIVSGGLV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH
GFSLLLGGYKFATQYVNLGGIKQYLIALIPLAIIVLVLPMTLPGDNFSHGQSLVVALLSA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AMYGVFLLIQTRTHQSLFVYEHEDEGDDPSDPHHGKPSSHCNLWHATWLVTYLIAVIAVT
HHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KLNAMPLEGLLAALNAPQQMTGFLVALLILSPEGLGALKAVLANQVQRAMNLFFGSVLAT
HCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLTVPTVTLIALLTDQPLLFGLGDPQMVVMLATLMLCQVSFSTGRTNVLNGAAHLVLFV
HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AYLMTLFL
HHHHHHHC
>Mature Secondary Structure
MKPHSKTSHHNTRHSEYQLILPLIALGILVVTQPTSLGALGAINLLALIAILASAFSVVR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HADVLAHRLGEPYGSLILTLSVVILEVSLISALMVSGKAAPELMRDTLYSIVMIVSGGLV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH
GFSLLLGGYKFATQYVNLGGIKQYLIALIPLAIIVLVLPMTLPGDNFSHGQSLVVALLSA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AMYGVFLLIQTRTHQSLFVYEHEDEGDDPSDPHHGKPSSHCNLWHATWLVTYLIAVIAVT
HHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KLNAMPLEGLLAALNAPQQMTGFLVALLILSPEGLGALKAVLANQVQRAMNLFFGSVLAT
HCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLTVPTVTLIALLTDQPLLFGLGDPQMVVMLATLMLCQVSFSTGRTNVLNGAAHLVLFV
HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AYLMTLFL
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Cytoplasm]; Proton [Periplasm]; Ca (II) [Cytoplasm]; Proton [Periplasm] [C]

Specific reaction: Na (I) [Cytoplasm] + Proton [Periplasm] = Proton [Cytoplasm] + Na (I) [Periplasm] Ca (II) [Cytoplasm] + Proton [Periplasm] = Ca (II) [Periplasm] + Proton [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8496184; 8905232; 9278503 [H]