| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919373
Identifier: 238919373
GI number: 238919373
Start: 1442690
End: 1442872
Strand: Reverse
Name: 238919373
Synonym: NT01EI_1467
Alternate gene names: NA
Gene position: 1442872-1442690 (Counterclockwise)
Preceding gene: 238919375
Following gene: 238919366
Centisome position: 37.85
GC content: 64.48
Gene sequence:
>183_bases ATGGCACAGGCCACTGAGCAACCGGCTGCGGGCGGTGTAAACCGGCACCGACAGGCCGGTGCCGATACCCGTCTGCCGCC GTTGTCATCCCCCCGCTGGAATCTACGTGGCCTACAGCATAACCGGCGCGACAGGCGCCGTCATGGCAGCACAAATAAAA CAGGCCACCCGAAGGTGGCCTGA
Upstream 100 bases:
>100_bases CGTCACCCGTGCCCGCCCCGGCGGCTCATGCAGCCGGTGGGCCACCAGCAGCAGCACAGGGGGAGCAGCCCGGGTCAGTA AATACCTCGACCCGGTCGCC
Downstream 100 bases:
>100_bases CGCTCACGCGGCGGGTGTCGCCATCGTGCTTAAAATCCCAGGCTGTCCAGCAGATCGTCAACCTGTTCCTGGTTGGCGAC GACCCCCGGGCCATTCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAQATEQPAAGGVNRHRQAGADTRLPPLSSPRWNLRGLQHNRRDRRRHGSTNKTGHPKVA
Sequences:
>Translated_60_residues MAQATEQPAAGGVNRHRQAGADTRLPPLSSPRWNLRGLQHNRRDRRRHGSTNKTGHPKVA >Mature_59_residues AQATEQPAAGGVNRHRQAGADTRLPPLSSPRWNLRGLQHNRRDRRRHGSTNKTGHPKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6673; Mature: 6541
Theoretical pI: Translated: 12.68; Mature: 12.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQATEQPAAGGVNRHRQAGADTRLPPLSSPRWNLRGLQHNRRDRRRHGSTNKTGHPKVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AQATEQPAAGGVNRHRQAGADTRLPPLSSPRWNLRGLQHNRRDRRRHGSTNKTGHPKVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA