| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cheZ [H]
Identifier: 238919372
GI number: 238919372
Start: 1442019
End: 1442660
Strand: Direct
Name: cheZ [H]
Synonym: NT01EI_1466
Alternate gene names: 238919372
Gene position: 1442019-1442660 (Clockwise)
Preceding gene: 238919371
Following gene: 238919374
Centisome position: 37.83
GC content: 57.01
Gene sequence:
>642_bases ATGAACGAACATCCGATGCCAGCCGCTGATGCCGGCGATATTATCGCCAGGATTGGCCAACTGACGCGTATGCTGCGTGA CAGCATGAAAGAGCTTGGACTGGATCAGGCCATCGCTCAGGCAGCCGAAGCCATTCCGGATGCCCGCGACCGTCTGGATT ATGTGGTGCAGATGACCCGTCAGGCCGCCGAGCGTGCCCTGAGCTGCGTTGAGGCGGCACAGCCACGTCAGACGCAGATG GAGAAGGAGTCCAAAGAGCTCAAGCAGCGTTGGGATGCCTGGTTTGAAAATCCGATCGAGCTTGAGGATGCCAGGGCGTT GGTAACGGATACCCGTCAGTTCTTGAGCGAGGTGCCGGAGCATACCGCCTTTACTCACAGCCAGCTGCTGGAAATCATGA TGGCGCAGGACTTTCAGGATCTGACCGGTCAGGTGATCAAGCGCATGATGGATGTGATCCAGGAGATTGAAAAGCAGCTG CTGATGGTGTTGCTGGAGAATATGCCTGAGCAGCCGTCCAAGCCGAAGCCGAAGAGTGAAAATGACAGCCTGCTGAATGG CCCGCAGATGAACCAGAATGGCCCGGGGGTCGTCGCCAACCAGGAACAGGTTGACGATCTGCTGGACAGCCTGGGATTTT AA
Upstream 100 bases:
>100_bases GGCGGGGGCCAGCGGCTACGTGGTGAAACCCTTTACTGCCGCAACGCTGGAAGAAAAACTGAATAAGATTTTTGAAAAGC TCGGGATCTAAGGAGTCACG
Downstream 100 bases:
>100_bases GCACGATGGCGACACCCGCCGCGTGAGCGTCAGGCCACCTTCGGGTGGCCTGTTTTATTTGTGCTGCCATGACGGCGCCT GTCGCGCCGGTTATGCTGTA
Product: chemotaxis regulator CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNEHPMPAADAGDIIARIGQLTRMLRDSMKELGLDQAIAQAAEAIPDARDRLDYVVQMTRQAAERALSCVEAAQPRQTQM EKESKELKQRWDAWFENPIELEDARALVTDTRQFLSEVPEHTAFTHSQLLEIMMAQDFQDLTGQVIKRMMDVIQEIEKQL LMVLLENMPEQPSKPKPKSENDSLLNGPQMNQNGPGVVANQEQVDDLLDSLGF
Sequences:
>Translated_213_residues MNEHPMPAADAGDIIARIGQLTRMLRDSMKELGLDQAIAQAAEAIPDARDRLDYVVQMTRQAAERALSCVEAAQPRQTQM EKESKELKQRWDAWFENPIELEDARALVTDTRQFLSEVPEHTAFTHSQLLEIMMAQDFQDLTGQVIKRMMDVIQEIEKQL LMVLLENMPEQPSKPKPKSENDSLLNGPQMNQNGPGVVANQEQVDDLLDSLGF >Mature_213_residues MNEHPMPAADAGDIIARIGQLTRMLRDSMKELGLDQAIAQAAEAIPDARDRLDYVVQMTRQAAERALSCVEAAQPRQTQM EKESKELKQRWDAWFENPIELEDARALVTDTRQFLSEVPEHTAFTHSQLLEIMMAQDFQDLTGQVIKRMMDVIQEIEKQL LMVLLENMPEQPSKPKPKSENDSLLNGPQMNQNGPGVVANQEQVDDLLDSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=209, Percent_Identity=77.0334928229665, Blast_Score=304, Evalue=3e-84,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 24099; Mature: 24099
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEHPMPAADAGDIIARIGQLTRMLRDSMKELGLDQAIAQAAEAIPDARDRLDYVVQMTR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHH QAAERALSCVEAAQPRQTQMEKESKELKQRWDAWFENPIELEDARALVTDTRQFLSEVPE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH HTAFTHSQLLEIMMAQDFQDLTGQVIKRMMDVIQEIEKQLLMVLLENMPEQPSKPKPKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NDSLLNGPQMNQNGPGVVANQEQVDDLLDSLGF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNEHPMPAADAGDIIARIGQLTRMLRDSMKELGLDQAIAQAAEAIPDARDRLDYVVQMTR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHH QAAERALSCVEAAQPRQTQMEKESKELKQRWDAWFENPIELEDARALVTDTRQFLSEVPE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH HTAFTHSQLLEIMMAQDFQDLTGQVIKRMMDVIQEIEKQLLMVLLENMPEQPSKPKPKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NDSLLNGPQMNQNGPGVVANQEQVDDLLDSLGF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]