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The map label for this gene is rcsB [C]

Identifier: 238919356

GI number: 238919356

Start: 1427231

End: 1427965

Strand: Direct

Name: rcsB [C]

Synonym: NT01EI_1450

Alternate gene names: 238919356

Gene position: 1427231-1427965 (Clockwise)

Preceding gene: 238919354

Following gene: 238919357

Centisome position: 37.44

GC content: 59.86

Gene sequence:

>735_bases
ATGACAGCAGTACAGGATCGTTTCGCTCACCAGTCTCCGCTTTCGGATACAGATCGCCGGGTGACGCTGGTGATGGACTG
CGATCGTTTTTTTTATCACAGTCTGGCGCAGCATATTATTTCTGACGATCGGATATTACATGAAACGCGCTATGCCCACC
TGGCGGAGGCAATCGCCACACGGCAGGTCGACCAGGTGATCGCCGAGCTGTATACCCATGATGATACGCCCATCGATGCG
CTGCTGGCGCTGATGCGCGTTCGCGCCTATCGTCCGTCGCTGCGGATTACGGTGATGACGGATATTACCCATCCGGCGGT
GCTGGCGGCCGTTCACAGCCTGGGGCAGGTGAGCCTGATCTCCAAGCGGGAGCCACTGCCCCGTCTCGCCGAGGCCTACC
GGCGTGCGCAGCGTCAGGCGCATCTCAGCCCGCGGATGATACGCAAGATGCAGGCACAGCCTGAGGTGGCCGGCATGTCG
TTTCACGAGTGGAAGGTGGTGGCCATCCGCAGCCGCGGCGGCGATAACTATCAGGTCGCCAGCTACCTTGGGATCCATCA
TAAAAGCGTTAACTATCGCCAGCGCTGCATCATGCAGAAACTGGCATTCGCCAGTAAGCCGGAGTTTTTGCGGTTTCTCA
GCGCAATGAGCGATAACCCGGTGCATGCTCCCTGCTTACCGCGGCACCGGCAGCACGCCGGTATGGGGCGGACGCCGCTG
AGCTCTCTGCGTTAA

Upstream 100 bases:

>100_bases
GGCACCTTGAATGGAGGATAATTATCCGCGCCGGATTGTCATCATCGCGATACGGTGATAGCCAGAGAGAGGGCCAACGC
GTGGGAAGGAGTGCCAGGCA

Downstream 100 bases:

>100_bases
CGCGCTTTCTACCGTATACAATGCGCGGTGCAGGCAATGTGGCGTCTATCACAACGTCCCCCGTACCGACGGACTCAGTC
GCTCGGAGTCAGAATACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTAVQDRFAHQSPLSDTDRRVTLVMDCDRFFYHSLAQHIISDDRILHETRYAHLAEAIATRQVDQVIAELYTHDDTPIDA
LLALMRVRAYRPSLRITVMTDITHPAVLAAVHSLGQVSLISKREPLPRLAEAYRRAQRQAHLSPRMIRKMQAQPEVAGMS
FHEWKVVAIRSRGGDNYQVASYLGIHHKSVNYRQRCIMQKLAFASKPEFLRFLSAMSDNPVHAPCLPRHRQHAGMGRTPL
SSLR

Sequences:

>Translated_244_residues
MTAVQDRFAHQSPLSDTDRRVTLVMDCDRFFYHSLAQHIISDDRILHETRYAHLAEAIATRQVDQVIAELYTHDDTPIDA
LLALMRVRAYRPSLRITVMTDITHPAVLAAVHSLGQVSLISKREPLPRLAEAYRRAQRQAHLSPRMIRKMQAQPEVAGMS
FHEWKVVAIRSRGGDNYQVASYLGIHHKSVNYRQRCIMQKLAFASKPEFLRFLSAMSDNPVHAPCLPRHRQHAGMGRTPL
SSLR
>Mature_243_residues
TAVQDRFAHQSPLSDTDRRVTLVMDCDRFFYHSLAQHIISDDRILHETRYAHLAEAIATRQVDQVIAELYTHDDTPIDAL
LALMRVRAYRPSLRITVMTDITHPAVLAAVHSLGQVSLISKREPLPRLAEAYRRAQRQAHLSPRMIRKMQAQPEVAGMSF
HEWKVVAIRSRGGDNYQVASYLGIHHKSVNYRQRCIMQKLAFASKPEFLRFLSAMSDNPVHAPCLPRHRQHAGMGRTPLS
SLR

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27906; Mature: 27774

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVQDRFAHQSPLSDTDRRVTLVMDCDRFFYHSLAQHIISDDRILHETRYAHLAEAIAT
CCCHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RQVDQVIAELYTHDDTPIDALLALMRVRAYRPSLRITVMTDITHPAVLAAVHSLGQVSLI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHHH
SKREPLPRLAEAYRRAQRQAHLSPRMIRKMQAQPEVAGMSFHEWKVVAIRSRGGDNYQVA
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEHH
SYLGIHHKSVNYRQRCIMQKLAFASKPEFLRFLSAMSDNPVHAPCLPRHRQHAGMGRTPL
HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCH
SSLR
HHCC
>Mature Secondary Structure 
TAVQDRFAHQSPLSDTDRRVTLVMDCDRFFYHSLAQHIISDDRILHETRYAHLAEAIAT
CCHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RQVDQVIAELYTHDDTPIDALLALMRVRAYRPSLRITVMTDITHPAVLAAVHSLGQVSLI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHHH
SKREPLPRLAEAYRRAQRQAHLSPRMIRKMQAQPEVAGMSFHEWKVVAIRSRGGDNYQVA
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEHH
SYLGIHHKSVNYRQRCIMQKLAFASKPEFLRFLSAMSDNPVHAPCLPRHRQHAGMGRTPL
HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCH
SSLR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA