| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is flgL [H]
Identifier: 238919266
GI number: 238919266
Start: 1342457
End: 1343392
Strand: Direct
Name: flgL [H]
Synonym: NT01EI_1356
Alternate gene names: 238919266
Gene position: 1342457-1343392 (Clockwise)
Preceding gene: 238919265
Following gene: 238919268
Centisome position: 35.21
GC content: 53.1
Gene sequence:
>936_bases ATGCGTTTAAGCAGCAGTATGATTTATCAGCAGAATATGAATGGTGTCCTCGATGCCCAGTCTGAGTGGCAGCGCGTCGG GGCCCAGCTGGACAGCGGGAAGAAAGTGATCAACCCGTCGGATGATCCGCTGGCTGCTTCCCAGCTGGTGGGACTGAATC AGTCCAAGTCAATGAATGAGCAGTACGGTATGGCCCGGGGCTATGCCCGTGAGAGCACCTCCATGGAAGAGAGCGTGCTG CAGCAGGTGACTAATGTGCTGCAGAATGCGACCCCGGTGCTGGTTGACGGGATGTCCTCCGGGACCAAGAGTGATGAGGA TCGTGCCGCGATTGCCACCCAGCTCTCCAGCATGCGTAATCAGCTGCTCAATCTGGCCAACAGCACCGACGGTAACGGCC GTTATATTTTTGCCGGTTACAAAAGTAATGCGGAACCCTTTGTCAAGGAAGCCAGCGGCGAAATTAAGTATGTTGGTGGC AAGAAAGCACTGACCCAGCAGGTTGATGCAGCGCGGACCATGATCGTCAGCCATACCGGTGATCATGTGTTTAAGTCCGA TAACGGTAAGAAGGATATTTTTGCCGCGTTACAAAAAGCGATCACGGCTCTGAATCAGCCACTGGATAAGGCGACGGATG CGGATAAGGCCAAGGTCGCCCAAGCGTTGAATGAGGCCAATACCGGATTGCGGGCCAGTCTGGATAATGTTTCAAAGGTT CGTGCCGAACTGGGTACCCAGTTAAATGAGCTGGACTCACTGGATGCCATCGGTGAGGAGAATGCGATCACCTTTAAAAC CCGTATCAGCGGTCTGCAGGATGTGAACTGGACTCAGGCCATCTCTGATTATACGTTCCGCCAGGTCTCGTTGCAGGCAT CCTATAAGGTATTTACCGATATGCAGGGAATGTCCCTGTTTAAGATGATGCGCTGA
Upstream 100 bases:
>100_bases GGTCCGTTTTCAACAGTACTATATGGCGAATGCTCAGGTCATCCAGAGTGCCCAGTCGCTGTTCAATGCATTGCTTAATA TCCGATAAGGGGGCACATCC
Downstream 100 bases:
>100_bases GTTTTTGTGCTGAGAAATAAAGGCGTGGCCCATGGGCCGCGCCTTTTGTGTATCTAACAGATGGGCTCTCCGGTGAGCGT CTGCGCGCGATGATCAACAA
Product: flagellar hook-associated protein 3
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRLSSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLAASQLVGLNQSKSMNEQYGMARGYARESTSMEESVL QQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSMRNQLLNLANSTDGNGRYIFAGYKSNAEPFVKEASGEIKYVGG KKALTQQVDAARTMIVSHTGDHVFKSDNGKKDIFAALQKAITALNQPLDKATDADKAKVAQALNEANTGLRASLDNVSKV RAELGTQLNELDSLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQASYKVFTDMQGMSLFKMMR
Sequences:
>Translated_311_residues MRLSSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLAASQLVGLNQSKSMNEQYGMARGYARESTSMEESVL QQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSMRNQLLNLANSTDGNGRYIFAGYKSNAEPFVKEASGEIKYVGG KKALTQQVDAARTMIVSHTGDHVFKSDNGKKDIFAALQKAITALNQPLDKATDADKAKVAQALNEANTGLRASLDNVSKV RAELGTQLNELDSLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQASYKVFTDMQGMSLFKMMR >Mature_311_residues MRLSSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLAASQLVGLNQSKSMNEQYGMARGYARESTSMEESVL QQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSMRNQLLNLANSTDGNGRYIFAGYKSNAEPFVKEASGEIKYVGG KKALTQQVDAARTMIVSHTGDHVFKSDNGKKDIFAALQKAITALNQPLDKATDADKAKVAQALNEANTGLRASLDNVSKV RAELGTQLNELDSLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQASYKVFTDMQGMSLFKMMR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=322, Percent_Identity=50.9316770186335, Blast_Score=327, Evalue=4e-91,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 33886; Mature: 33886
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLAASQLVGLNQSKSMNE CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHH QYGMARGYARESTSMEESVLQQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSMRN HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH QLLNLANSTDGNGRYIFAGYKSNAEPFVKEASGEIKYVGGKKALTQQVDAARTMIVSHTG HHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCC DHVFKSDNGKKDIFAALQKAITALNQPLDKATDADKAKVAQALNEANTGLRASLDNVSKV CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH RAELGTQLNELDSLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQASYKVFTD HHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC MQGMSLFKMMR CCHHHHHHHCC >Mature Secondary Structure MRLSSSMIYQQNMNGVLDAQSEWQRVGAQLDSGKKVINPSDDPLAASQLVGLNQSKSMNE CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHH QYGMARGYARESTSMEESVLQQVTNVLQNATPVLVDGMSSGTKSDEDRAAIATQLSSMRN HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH QLLNLANSTDGNGRYIFAGYKSNAEPFVKEASGEIKYVGGKKALTQQVDAARTMIVSHTG HHHHHHCCCCCCCEEEEEECCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCC DHVFKSDNGKKDIFAALQKAITALNQPLDKATDADKAKVAQALNEANTGLRASLDNVSKV CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH RAELGTQLNELDSLDAIGEENAITFKTRISGLQDVNWTQAISDYTFRQVSLQASYKVFTD HHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC MQGMSLFKMMR CCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8158647; 8905232; 9278503; 1447789 [H]